Job Description P29217 Confidence 48.55% Date Thu Jan 5 11:45:38 GMT 2012 Rank 95 Aligned Residues 80 % Identity 19% Template c2nnnB_ PDB info PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulator; PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa Resolution 2.40 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	V	T	K	Y	E	Q	R	F	C	N	S	E	F	G	D	L	K	L	S	A	A	E	V	A	L	I	T	T	L	L	L	R	G	A	Q	T	P	G	E	L	R	S	R	A	A	R	M	Y	E	F	S	D	M	A	E	V	E	S	T	L	E	Q	L	A	N	R	E	D	G	P	F	V	V	R	L	A	R	E
Query Conservation
Alig confidence																			.																													.	.	.	.	.																			.	.	.
Template Conservation																			.																													.	.	.	.	.																			.	.	.
Template Sequence		R	Q	A	N	Q	R	Y	A	A	L	F	A	N	G	I	G	N	.	G	L	T	P	T	Q	W	A	A	L	V	R	L	G	E	T	G	P	C	P	Q	N	Q	L	G	R	L	T	.	.	.	.	.	A	X	D	A	A	T	I	K	G	V	V	E	R	L	D	K	R	G	.	.	.	L	I	Q	R	S	A	D	P
Template Known Secondary structure																	S	S	.																		S	B									T	.	.	.	.	.	T																T	T	.	.	.								T
Template Predicted Secondary structure																			.																													.	.	.	.	.																			.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	K	R	E	N	R	Y	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	G	R	R	L	L	V	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions