Job Description P29217 Confidence 28.65% Date Thu Jan 5 11:45:38 GMT 2012 Rank 135 Aligned Residues 52 % Identity 15% Template c2l4aA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	A	L	E	A	R	V	I	G	C	L	L	E	K	Q	V	T	T	P	E	Q	Y	P	L	S	V	N	G	V	V	T	A	C	N	Q	K	T	N	R	E	P	V	M	N	L	S	E	S	E	V	Q	E	Q	L	D	N	L	V	K	R	H	Y	L	R	T	V	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	D	R	I	D	R	N	I	L	N	E	L	Q	K	D	.	.	.	.	.	.	.	G	R	I	S	N	V	E	L	S	K	R	V	.	.	.	.	.	.	.	.	.	.	G	L	S	P	T	P	C	L	E	R	V	R	R	L	E	R	Q	G	F	I	Q	G	Y	T
Template Known Secondary structure		G																.	.	.	.	.	.	.	T	T			S						T	T	.	.	.	.	.	.	.	.	.	.	T	S															T	T			S	S	S	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.											.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions