Return to main results Retrieve Phyre Job Id

Job DescriptionP29217
Confidence88.98%DateThu Jan 5 11:45:38 GMT 2012
Rank13Aligned Residues55
% Identity20%Templatec2k4bA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:transcriptional regulator; PDBTitle: copr repressor structure
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150.
Predicted Secondary structure 



















Query SS confidence 


























































Query Sequence  LKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVR
Query Conservation 
 
   
 


  







 






 

  
 
   

  
  
  
   



 
Alig confidence 

































.
















...



Template Conservation    

  
  

  

     
  

   
     .   


 
 
 

  

... 
  
Template Sequence  FNVSNAELIVMRVIWSLGEARVDEIYAQIPQELE. WSLATVKTLLGRLVKKE. . . MLST
Template Known Secondary structure 




S
SS
T

GGG
.

TT...S
Template Predicted Secondary structure 














.



...
Template SS confidence 


























































   31........40.........50.........60.... .....70.........80. ....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions