Return to main results Retrieve Phyre Job Id

Job DescriptionP76192
Confidence22.01%DateThu Jan 5 12:20:18 GMT 2012
Rank29Aligned Residues40
% Identity5%Templated1u5ta1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   351........360.........370.........380.........390
Predicted Secondary structure 




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Query Sequence  KDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYC
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Template Sequence  ASPEFRSKFMHMCSSIGIDPLSLFDRDKHLFTVNDFYYEV
Template Known Secondary structure  T
T

TTSSGGGTT
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   56...60.........70.........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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