Job Description P76539 Confidence 99.78% Date Thu Jan 5 12:24:11 GMT 2012 Rank 63 Aligned Residues 129 % Identity 22% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		M	E	I	R	V	F	R	Q	E	D	F	E	E	V	I	T	L	W	E	R	C	D	L	L	R	P	W	N	D	P	E	M	D	I	E	R	K	M	.	.	.	.	.	N	H	D	V	S	L	F	L	V	A	E	V	N	G	D	V	V	G	T	V	M	G	G	.	.	.	.	.	.	Y	D	G	H	R	G	S	A
Query Conservation																																								.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G	L	R	G	F	V
Template Known Secondary structure		G	G						G	G	G															T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	L	G	V	H	P	E	F	R	G	R	G	I	A	N	A	L	L	N	R	L	E	K	K	L	I	A	R	G	C	P	K	I	Q	I	N	V	P	E	D	N	D	M	V	L	G	M	Y	E	R	L	G	Y	E	H	A	D	V	L	S	L	G	K	R	L	I	E
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence		D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R	X	L	L	G	Q	A	L	A	P
Template Known Secondary structure								G	G	G	T	T	S	S																T	T									.	.	.	.	.	.	.	.						T	T													S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions