Job Description P77031 Confidence 100.00% Date Thu Jan 5 12:25:28 GMT 2012 Rank 2 Aligned Residues 414 % Identity 8% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	H	N	S	Y	R	R	W	I	T	L	A	I	I	S	F	S	G	G	V	S	F	D	L	A	Y	L	R	Y	I	Y	Q	I	P	M	A	K	F	M	G	F	S	N	T	E	I	G	L	I	M	S	T	F	G	I	A	A	I	I	L	Y	A	P	S	G	V	I	A	D	K	F	S	H	R	K	M	I	T	S
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		M	Y	Y	L	K	N	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	.	.	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W
Template Known Secondary structure							S																				.	.																																		T												T	T		T
Template Predicted Secondary structure																											.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	I	I	T	G	L	L	G	L	L	M	A	T	Y	P	P	L	W	V	M	L	C	I	Q	I	A	F	A	I	T	T	I	L	M	L	W	S	V	S	I	K	A	A	S	L	L	G	D	H	S	E	Q	G	K	I	M	G	W	M	E	G	L	R	G	V	G	V	M	S	L	A	V	F	T	M	W	V	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V
Template Known Secondary structure									T								T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	P	D	D	S	T	S	L	K	T	V	I	I	I	Y	S	V	V	Y	I	L	L	G	I	L	C	W	F	F	V	S	D	N	N	N	L	R	S	A	N	N	E	E	K	Q	S	F	Q	L	S	D	I	L	A	V	L	R	I	S	T	T	W	Y	C	S	M	V	I	F	G	V	F	T	I	Y	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V
Template Known Secondary structure																													S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	S	T	N	Y	L	T	E	M	Y	G	M	S	L	V	A	A	S	Y	M	G	I	V	I	N	K	I	F	R	A	L	C	G	P	L	G	G	I	I	T	T	Y	S	K	V	K	S	P	T	R	V	I	Q	I	L	S	V	L	G	L	L	T	L	T	A	L	L	V	T	N	S	N	P	Q	S	V	A	M	G
Query Conservation
Alig confidence																																																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	.	.	.	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	F	A	T	S	A	L	E	V
Template Known Secondary structure											T	T	S	S	S																									T	T											.	.	.																				T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		I	G	L	I	L	L	L	G	F	T	C	Y	A	S	R	G	L	Y	W	A	C	P	G	E	A	R	T	P	S	Y	I	M	G	T	T	V	G	I	C	S	V	I	G	F	.	L	P	D	V	F	V	Y	P	I	I	G	H	W	Q	D	T	L	P	A	A	E	A	Y	R	N	M	W	L	M	G	M	A	A	L	G
Query Conservation																																														.
Alig confidence																											.																			.																			.	.	.	.
Template Conservation																											.																																						.	.	.	.
Template Sequence		V	I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	.	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	.	.	.	.	F	Q	G	A	Y	L	V	L	G	L	V	A	L
Template Known Secondary structure																											.	S		G	G	G										T	T	T																					.	.	.	.
Template Predicted Secondary structure																											.																																						.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.					.	.	380	.	.	.	.	.	.	.	.	.	390
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	I	V	F	T	F	L	L	F	Q	K	I	R	T	A	D	S	A	P	A	M	A	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	T	L	I	S	V	F	T	L	S	G	P	G	P	L	S	L	L	R	R	Q	V	N	E
Template Known Secondary structure											S			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.