 |
Job Description | P77031 | Confidence | 1.90% | Date | Thu Jan 5 12:25:28 GMT 2012 |
Rank | 34 | Aligned Residues | 71 |
% Identity | 14% | Template | c3fewX_ |
PDB info |
PDB header:immune system | Chain: X: PDB Molecule:colicin s4; |
PDBTitle: structure and function of colicin s4, a colicin with a2 duplicated receptor binding domain
|
Resolution | 2.45 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | |
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | H | N | S | Y | R | R | . |
W | I | T | L | A | I | I | S | F | S | G | G | V | S | F | D | L | A | Y | L | R | Y | I | Y | Q | I | P | M | A | K | F | M | G | F | S | N | T | E | I | G | L | I | M | S | T | F | G | I | A | A | I | I | L | Y | A | P | S | G | V | I | A | D | K | F | S | H |
Query Conservation |   |
  |   |   |   |   |
|
| . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
Template Sequence |   |
E | T | G | N | W | G | P | L | M | L | E | V | E | S | W | V | L | S | G | I | A | S | A | V | A | L | G | V | F | S | A | T | L | G | A | Y | A | L | S | L | G | A | P | A | I | A | V | G | I | V | G | I | . |
. |
L | L | A | A | V | V | G | A | L | L | D | D | K | F | A | D | A | L | N | K |
Template Known Secondary structure |   |
 |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
| S | S |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
421 | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | |
|
. | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|