Job Description P76558 Confidence 100.00% Date Thu Jan 5 12:24:36 GMT 2012 Rank 23 Aligned Residues 273 % Identity 18% Template d1vi1a_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.95

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		444	.	.	.		.	.	450	.	.				.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure						.						.	.	.														.
Query SS confidence						.						.	.	.														.
Query Sequence		R	V	V	L	.	P	E	G	E	E	.	.	.	A	R	V	L	H	A	T	Q	E	L	V	T	L	.	G	L	A	K	P	I	L	I	G	R	P	N	V	I	E	M	R	I	Q	K	L	G	L	Q	I	K	A	G	V	D	F	E	I	V	N	N	E	S	D	P	R	F	K	E	Y	W	T	E	Y	F	Q	I	M
Query Conservation						.						.	.	.														.
Alig confidence						.						.	.	.														.																									.	.	.	.	.	.																			.	.
Template Conservation																																																					.	.	.	.	.	.																			.	.
Template Sequence		R	I	A	V	D	A	X	G	G	D	H	A	P	K	A	V	I	D	G	V	I	K	G	I	E	A	F	D	D	L	H	I	T	L	V	G	D	K	T	T	I	E	S	H	L	T	T	T	S	D	R	.	.	.	.	.	.	I	T	V	L	H	A	D	E	V	I	E	P	T	D	E	P	V	R	.	.	A	V	R
Template Known Secondary structure							S	S		S	S	S	T	T															T	T														T	T			S			T	T	.	.	.	.	.	.								B				T	T	S					.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.																			.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		K	R	R	G	V	T	Q	E	Q	A	Q	R	A	L	I	S	N	P	T	V	I	G	A	I	M	V	Q	R	G	E	A	D	A	M	I	C	G	T	V	G	D	Y	H	E	H	F	S	V	V	K	N	V	F	G	Y	R	D	G	V	H	T	A	G	A	M	N	A	L	L	L	P	S	.	G	N	T	F	I	A	D
Query Conservation																																																																										.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																						.	.																																		.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		R	K	K	N	.	.	.	.	.	.	.	.	.	.	.	.	S	S	X	V	L	X	A	Q	E	V	A	E	N	R	A	D	A	C	I	S	A	.	.	G	N	T	G	A	L	X	T	A	G	L	F	I	V	G	R	I	K	G	I	D	R	P	A	L	A	P	T	L	P	T	V	S	G	D	G	F	L	L	L	D
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	B											T	T	S		S						.	.	S												T	T		B		T	T		S	S										S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		74	.	.	.													.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.		.	.	.	.		.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure																											.					.
Query SS confidence																											.					.
Query Sequence		T	Y	V	N	D	E	P	D	A	E	E	L	A	E	I	T	L	M	A	A	E	T	V	R	R	.	F	G	I	E	.	P	R	V	A	L	L	S	H	S	N	F	G	S	S	D	C	P	S	S	S	K	M	R	Q	A	L	E	L	V	R	E	R	A	P	E	L	M	I	D	G	E	M	H	G	D	A	A	L	V
Query Conservation																											.					.
Alig confidence																											.					.									.	.	.																						.																.
Template Conservation																																									.	.	.																						.																.
Template Sequence		V	G	A	N	V	D	A	K	P	E	H	L	V	Q	Y	A	I	X	G	S	V	Y	S	Q	Q	V	R	G	V	T	S	P	R	V	G	L	L	N	V	.	.	.	G	T	E	D	K	K	G	N	E	L	T	K	Q	T	F	Q	I	L	K	E	T	.	A	N	I	N	F	I	G	N	V	E	A	R	D	L	L	.
Template Known Secondary structure		S	S	S		S	S																				T	S			S	S								S	.	.	.	S	S	S	T	T		S													S		.	T	T	S								G	G	G	G	G	.
Template Predicted Secondary structure																																									.	.	.																						.																.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.																													.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	I	R	N	D	R	M	P	D	S	S	L	K	G	S	A	N	I	L	V	M	P	N	M	E	A	A	R	I	S	Y	N	L	L	R	V	S	S	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	T	V	G	P	V	L	M	G	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	V	A	D	V	V	V	T	.	D	G	F	T	G	N	V	T	L	K	T	L	E	G	S	A	L	S	I	F	K	X	X	R	D	V	X	T	S	T	L	V	L	K	P	K	L	K	E	X	K	X	K	X	E	Y	S	N	Y	G	G	A	S	L	F	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S		S					.																												T	T	T																G	G	G	S							T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
															215	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	P	V	H	V	L	T	P	I	A	S	V	R	R	I	V	N	M	V	A	L	A	V	V	E	A	Q	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	P	V	I	K	A	H	G	S	S	D	S	N	A	V	F	R	A	I	R	Q	A	R	E	X	V	S	Q	N
Template Known Secondary structure		S	S							T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions