Job Description P76558 Confidence 100.00% Date Thu Jan 5 12:24:36 GMT 2012 Rank 25 Aligned Residues 269 % Identity 23% Template d1u7na_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.26

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		443	.	.	.	.		.	.	450	.	.				.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure							.						.	.	.																.
Query SS confidence							.						.	.	.																.
Query Sequence		K	R	V	V	L	.	P	E	G	E	E	.	.	.	A	R	V	L	H	A	T	Q	E	L	V	T	L	G	L	.	A	K	P	I	L	I	G	R	P	N	V	I	E	M	R	I	Q	K	L	G	L	Q	I	K	A	G	V	D	F	E	I	V	N	N	E	S	D	P	R	F	K	E	Y	W	T	E	Y	F	Q	I
Query Conservation							.						.	.	.																.
Alig confidence							.						.	.	.																.																					.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		X	K	I	A	V	D	A	X	G	G	D	N	A	P	Q	A	I	V	E	G	V	X	L	A	K	Q	D	F	P	D	I	E	F	Q	L	Y	G	K	E	A	E	I	K	K	Y	I	T	D	E	K	.	.	.	.	.	.	.	N	I	T	I	I	H	T	D	E	K	I	A	S	D	D	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S		S	T	T	T	T															T	T														T	T		S			T	.	.	.	.	.	.	.	T							S					T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.				.	590	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		M	K	R	R	G	V	T	Q	E	Q	A	Q	R	A	L	I	S	N	P	T	V	I	G	A	I	M	V	Q	R	G	E	A	D	A	M	I	C	G	T	V	G	D	Y	H	E	H	F	S	V	V	K	N	V	F	G	Y	R	D	G	V	H	T	A	G	A	M	N	A	L	L	L	.	.	.	P	S	G	N	T	F
Query Conservation																																																																									.	.	.
Alig confidence		.	.	.	.	.	.																																	.	.																																.	.	.
Template Conservation		.	.	.	.	.	.																																	.	.
Template Sequence		.	.	.	.	.	.	E	P	V	K	A	I	R	R	K	K	T	A	S	X	V	L	A	A	Q	A	V	K	N	G	E	A	D	A	I	F	S	A	.	.	G	N	T	G	A	L	L	A	A	G	L	F	I	V	G	R	I	K	N	V	E	R	P	G	L	X	S	T	L	P	V	X	G	E	P	D	K	G	F	D
Template Known Secondary structure		.	.	.	.	.	.										T	T	S												T	S		S					S	.	.	S												T	T		B		T	T		S	S										T	T		T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																	.	.
Template SS confidence
								66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.		.	.	.	.		.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure																														.					.
Query SS confidence																														.					.
Query Sequence		I	A	D	T	Y	V	N	D	E	P	D	A	E	E	L	A	E	I	T	L	M	A	A	E	T	V	R	R	.	F	G	I	E	.	P	R	V	A	L	L	S	H	S	N	F	G	S	S	D	C	P	S	S	S	K	M	R	Q	A	L	E	L	V	R	E	R	A	P	E	L	M	I	D	G	E	M	H	G	D	A
Query Conservation																														.					.
Alig confidence																														.					.										.				.	.	.	.	.	.													.
Template Conservation																																													.				.	.	.	.	.	.													.
Template Sequence		X	L	D	L	G	A	N	A	D	N	K	P	E	H	L	V	Q	Y	A	V	L	G	S	F	Y	A	E	K	V	R	N	V	Q	N	P	R	V	G	L	L	N	N	G	.	T	G	S	.	.	.	.	.	.	E	L	T	K	K	A	F	E	L	L	A	A	.	D	E	T	I	N	F	V	G	N	V	E	A	R	E
Template Known Secondary structure					S	S	S		S																					T	T			S	S								S		.				.	.	.	.	.	.													.		T	T	S								G	G	G
Template Predicted Secondary structure																																													.				.	.	.	.	.	.													.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.							.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.
		673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710																														.	.	.	.	.	.	.	.	.	720	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	V	E	A	I	R	N	D	R	M	P	D	S	S	L	K	G	S	A	N	I	L	V	M	P	N	M	E	A	A	R	I	S	Y	N	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	S	S	S	E	G	V	T	V	G	P	V
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	V	A	D	V	V	V	.	T	D	G	F	T	G	N	A	V	L	K	S	I	E	G	T	A	X	N	X	X	S	L	L	K	T	A	I	L	S	G	A	L	L	L	K	N	A	L	H	G	X	K	D	E	X	D	Y	S	K	H	G	G	A	V
Template Known Secondary structure		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G		S		S				.																													T																	T		G	G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		214	.															.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	G	V	A	K	P	V	H	V	L	T	P	I	A	S	V	R	R	I	V	N	M	V	A	L	A	V	V	E	A	Q	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	G	L	K	A	P	V	I	K	T	H	G	A	T	G	P	D	A	V	R	Y	T	I	R	Q	I	H	T	X	L	E	T	Q
Template Known Secondary structure				T	B	S	S							T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions