Job Description P76558 Confidence 99.43% Date Thu Jan 5 12:24:36 GMT 2012 Rank 28 Aligned Residues 276 % Identity 17% Template d1r8ka_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PdxA-like Resolution 2.10

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		442	.	.	.	.	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.														.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure												.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	R	V	V	L	P	E	G	E	.	.	.	.	.	E	A	R	V	L	H	A	T	Q	E	L	V	T	L	G	L	A	K	P	I	L	I	G	R	P	N	V	I	E	M	R	I	Q	K	L	G	L	Q	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	V	D	F	E	I	V	N	N	E	S
Query Conservation												.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.											.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		A	Q	R	V	V	I	T	P	G	E	P	A	G	S	G	P	D	L	V	V	Q	L	A	Q	R	.	.	.	A	W	P	I	E	L	V	V	C	A	D	G	A	L	L	T	E	R	A	A	X	L	G	L	P	L	S	L	L	P	Y	S	P	D	V	P	A	A	P	Q	P	A	G	T	L	T	L	L	P	V	S	L
Template Known Secondary structure												T	T	S	S									T	T	S	.	.	.			S	S																		T	T										T	T	S							T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.						.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		D	P	R	F	K	E	Y	W	T	E	Y	F	Q	I	M	K	R	R	G	V	T	Q	E	Q	A	Q	R	A	L	I	S	N	P	T	V	I	G	A	I	M	V	Q	R	G	E	A	D	A	M	I	C	G	T	V	G	D	Y	H	E	H	F	S	V	V	.	.	.	.	.	K	N	V	F	G	Y	R	D	G	V	H
Query Conservation																																																																		.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.														.																																		.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		R	A	P	A	I	.	.	.	.	.	.	.	.	.	.	.	.	S	G	Q	L	T	V	E	N	G	P	Y	V	V	.	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	S	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K
Template Known Secondary structure		S	S			B	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B			G	G	G						.												T	T	S		S														T	T	T				S										T	T		S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		81	.	.	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.						.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.		.	.	.	.		.	.	.	630	.	.	.	.					.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																													.					.									.	.	.	.
Query SS confidence																		.	.	.	.	.																													.					.									.	.	.	.
Query Sequence		T	A	G	A	M	N	A	L	L	L	P	S	G	N	T	F	.	.	.	.	.	I	A	D	T	Y	V	N	D	E	P	D	A	E	E	L	A	E	I	T	L	M	A	A	E	T	V	R	R	.	F	G	I	E	.	P	R	V	A	L	L	S	H	.	.	.	.	S	N	F	G	S	S	D	C	P	S	S	S	K
Query Conservation																		.	.	.	.	.																													.					.									.	.	.	.
Alig confidence																		.	.	.	.	.									.	.																			.					.									.	.	.	.
Template Conservation																															.	.
Template Sequence		K	V	V	X	X	L	A	T	E	E	L	R	V	A	L	A	T	T	H	L	P	L	R	A	I	A	D	A	I	.	.	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	X	G	T	E	E	I	D	T
Template Known Secondary structure										S	S						S	S		S											.	.																			T	S			S	S								S	S	G	G	G	G	G	G	G	T	T		S					T
Template Predicted Secondary structure																															.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Q	A	L	E	L	V	R	E	R	A	P	E	L	M	I	D	G	E	M	H	G	D	A	A	L	V	E	A	I	R	N	D	R	M	P	D	S	S	L	K	G	S	A	N	I	L	V	M	P	N	M	E	A	A	R	I	S	Y	N	L	L	R	V	S	S	S	E	G	V	T	V	G	P	V	L	M	G	V
Query Conservation
Alig confidence													.	.																			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation													.	.																			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Sequence		I	I	P	V	L	D	E	L	R	A	Q	.	.	G	X	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	.	.	.	.	.	.	.	.	.	.	L	D	N	A	D	A	V	L	A	X	Y	H	D	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N	I	T	L	G	.	.	.	.	.	.
Template Known Secondary structure											T	T	.	.	T													S	S				.	.	.	.	.	.	.	.	.	.		T	T		S					S	S													T	T								S	.	.	.	.	.	.
Template Predicted Secondary structure													.	.																			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.											.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		728	.	730	.	.	.	.	.	.													.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	P	V	H	V	L	T	P	.	.	.	.	.	.	.	.	.	.	.	.	I	A	S	V	R	R	I	V	N	M	V	A	L	A	V	V	E	A
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	L	P	F	I	R	T	S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K	X	I
Template Known Secondary structure		.	S	S	S						S	S				T	T	T	T	T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions