 |
Job Description | P76558 | Confidence | 96.90% | Date | Thu Jan 5 12:24:36 GMT 2012 |
Rank | 68 | Aligned Residues | 127 |
% Identity | 11% | Template | d1nyta1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Aminoacid dehydrogenase-like, C-terminal domain
|
Resolution | 1.50 |
|
 |
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
|
. | . | . | . | 250 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
A | I | L | N | G | L | R | V | V | E | K | N | I | S | D | V | R | M | V | V | S | G | A | G | A | A | A | I | A | C | M | N | L | L | V | A | L | G | L | Q | K | H | N | I | V | V | C | D | S | K | G | V | I | Y | Q | G | R | E | P | N | M | A | E | T | K | A | A | Y | A | V | V | D | D | . |
. |
G | K | R | T | L |
Query Conservation |   |
|
|
|   |
|
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   | . | . |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |
|
|   |   |   |
|   | . | . | . |   |
|   |
|   |   |
| . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
G | L | L | S | D | L | E | R | L | S | F | I | R | P | G | L | R | I | L | L | I | G | A | G | G | A | S | R | G | V | L | L | P | L | L | S | L | D | C | . |
. |
. |
A | V | T | I | T | N | R | . |
. |
. |
. |
. |
. |
. |
T | V | S | R | A | E | E | L | A | K | L | F | A | H | T | G | S | I | Q | A | L | S | M | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|
| T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . |  |  |  |  |  |
| S | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  | T | G | G | G | S | S |  |  |  |
|
| S | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
. | . | . | . | . | . | 150 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | |
. | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | V | I | E | G | A | D | I | F | L | G | C | S | G | P | K | V | . |
. |
. |
L | T | Q | E | M | V | K | K | M | A | R | A | P | M | I | L | A | L | A | . |
N | P | E | P | E | I | L | P | P | L | A | K | E | V | R | P | D | A | I | I | C | T | G |
Query Conservation |   |
  |
|   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|   | . | . | . |
|
|   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
| . |
|
|
|   |
|   |   |
|
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   | . |
|   |   |   |   |
|   |
|
Template Sequence |   |
E | L | E | G | H | E | F | D | L | I | I | N | A | T | S | S | G | I | S | G | D | I | P | A | I | P | S | S | L | I | H | P | G | I | Y | C | Y | D | M | F | Y | Q | K | G | K | T | P | F | L | A | W | C | E | Q | R | . |
G | S | K | R | N | A | D | G |
Template Known Secondary structure |   |
G | G | T | T |
|
|
| S |  |  |  |  |
|
| S |
| G | G | G | T |
|
|
|
|
|
| G | G | G |
|
| T | T |
|  |  |  |  | S |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  | T | . | T |
|
|  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
230 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|