Return to main results Retrieve Phyre Job Id

Job DescriptionP76558
Confidence97.73%DateThu Jan 5 12:24:36 GMT 2012
Rank48Aligned Residues138
% Identity21%Templated1l7da1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Formate/glycerate dehydrogenases, NAD-domain
Resolution1.81

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.. .......190.........200.........210.........220.........230.........240.
Predicted Secondary structure 

.........






















Query SS confidence 











. . . . . . . . .


























































Query Sequence  TAAILNGLRVVE. . . . . . . . . KNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAYA
Query Conservation 




 


  
.........  
 
  

  





 


 

   
     
   
  


   
   
   
   
Alig confidence 











.........




























...






....















Template Conservation   
 
 

              
      
 


 
 

   
  
   
 ... 
   
 ....       
   
    
Template Sequence  RAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGA. . . VVMATDV. . . . RAATKEQVESLGGKFI
Template Known Secondary structure 
SS
SS
TT




STT
...
S....
STTTT

Template Predicted Secondary structure 





















...
....



Template SS confidence 















































































   147..150.........160.........170.........180.........190...... ...200... ......210.........
 
   242.......250.........260.... .....270.........280.........290 .........300.........310.
Predicted Secondary structure 












......














....










Query SS confidence 






















. . . . . .

























. . . .




















Query Sequence  VVDDGKRTLDDVIEGADIFLGCS. . . . . . GPKVLTQEMVKKMARAPMILALANPE. . . . PEILPPLAKEVRPDAIICTGR
Query Conservation          
 
 
    



 
......  
 

 
 
  

  









.... 
  

 
    
  
 



Alig confidence 






















......

























....
















..

Template Conservation          
       



            

    
  

 







   

  
 
         

   ..  
Template Sequence  TVKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIV. . GH
Template Known Secondary structure 



TT
S



TTS




S
TTS
TT
TTGGGT
SSTT

TT
TT..

Template Predicted Secondary structure 













































..
Template SS confidence 















































































   220.........230.........240.........250.........260.........270.........280.........290..... ..
 
   312.....
Predicted Secondary structure 





Query SS confidence 





Query Sequence  SDYPNQ
Query Conservation 
  
 
Alig confidence 





Template Conservation    

  
Template Sequence  TNVPSR
Template Known Secondary structure  SSGGG
Template Predicted Secondary structure 





Template SS confidence 





   321.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions