Job Description P76558 Confidence 98.42% Date Thu Jan 5 12:24:36 GMT 2012 Rank 33 Aligned Residues 225 % Identity 18% Template c3tozA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. Resolution 2.20 Å

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		70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.
Predicted Secondary structure												.																											.	.																															.	.	.	.	.
Query SS confidence												.																											.	.																															.	.	.	.	.
Query Sequence		I	S	N	G	T	A	V	L	G	L	.	G	N	I	G	A	L	A	G	K	P	V	M	E	G	K	G	V	L	F	K	K	F	A	G	I	D	.	.	V	F	D	I	E	V	D	E	L	D	P	D	K	F	I	E	V	V	A	A	L	E	P	T	F	G	G	I	N	L	.	.	.	.	.	E	D	I	K	A	P
Query Conservation												.																											.	.																															.	.	.	.	.
Alig confidence												.			.	.																			.				.	.																					.	.									.	.	.	.	.				.
Template Conservation															.	.																			.																										.	.																	.
Template Sequence		I	T	G	H	T	E	L	I	G	L	I	A	T	.	.	P	I	R	H	S	L	S	P	T	M	H	N	E	A	F	A	K	L	.	G	L	D	Y	V	Y	L	A	F	E	V	G	D	K	E	L	K	D	V	V	Q	G	F	R	A	.	.	M	N	L	R	G	W	N	V	S	M	P	N	K	T	N	I	.	H	K
Template Known Secondary structure				S	S									S	.	.	S		T	T		S													.	T																									.	.	T	T								T	T	S	T	T	T	G	.	G	G
Template Predicted Secondary structure															.	.																			.																										.	.																	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.
		142	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		E	C	F	Y	I	E	Q	K	L	R	E	R	.	.	M	N	I	P	V	F	H	D	D	Q	H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C
Query Conservation														.	.
Alig confidence														.	.																																																											.	.
Template Conservation																																																																										.	.
Template Sequence		Y	L	D	K	L	S	P	A	A	E	L	V	G	A	V	N	T	V	V	N	D	D	G	V	L	T	G	H	I	T	D	G	T	G	Y	M	R	A	L	K	E	A	G	H	D	I	I	G	K	K	M	T	I	C	G	A	G	G	A	A	T	A	I	C	I	Q	A	A	L	D	G	V	.	.	K	E	I	S	I	F
Template Known Secondary structure		G		S										T			S						T	T																			T	T				T	T	S								S														T		.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.							270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	.	.	.	.	.	.	.	.	.	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	G	P	K	V	L	.	.	.	.	.	.	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L
Query Conservation																									.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence				.	.	.	.																		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		N	R	.	.	.	.	K	D	D	F	Y	A	N	A	E	K	T	V	E	K	I	N	S	K	T	D	C	K	A	Q	L	F	D	I	E	D	H	E	Q	L	R	K	E	I	A	E	S	V	I	F	T	N	A	T	G	V	G	M	K	P	F	E	G	E	T	L	L	P	S	A	D	M	L	R	P	E	L	I	V	S
Template Known Secondary structure				.	.	.	.	S	S	T	T															S	S								T	T											T		S						S	S	T	T	S	T	T	S	T	T			S				G	G	G			T	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		161	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		285	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	L	A	.	N	P	E	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		D	V	V	Y	K	P	T	K	T	R	L	L	E	I	A	E	E	Q	G	C	Q	T	L
Template Known Secondary structure			S			S	S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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