Job Description P76558 Confidence 96.94% Date Thu Jan 5 12:24:36 GMT 2012 Rank 66 Aligned Residues 203 % Identity 24% Template c3p2yA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis Resolution 1.82 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		P	L	K	A	Y	K	Y	T	A	R	G	N	L	V	A	V	I	S	N	G	T	A	V	L	G	L	G	N	I	G	A	L	A	G	K	P	V	M	E	G	K	G	V	L	F	K	K	F	A	G	I	.	.	.	.	.	.	D	V	F	D	I	E	V	D	E	L	D	P	D	K	F	I	E	V	V	A	A	L	E
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.															.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		P	K	V	V	E	K	L	S	A	R	G	L	E	V	V	V	E	S	A	A	G	A	G	A	L	F	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Y	E	R	A	G	A	T	I	G	D	P	W	P	A	D	V	V	V	K	V	N	P	P	T	S	D	E	.	.	.	.	I	S	Q	L	K
Template Known Secondary structure											T	T							T	T	T	T	G	G	G	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T				S			T	T	S	S					S	S							.	.	.	.		T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170					.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.											.	.	.	.				.	.	.																.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.											.	.	.	.				.	.	.																.	.	.	.	.
Query Sequence		P	T	F	G	G	I	N	L	E	D	I	K	A	P	E	C	F	Y	I	E	Q	K	L	R	E	R	M	N	I	P	V	F	H	.	.	.	.	.	.	.	D	D	Q	H	G	T	A	I	I	S	.	.	.	.	T	A	A	.	.	.	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.											.	.	.	.				.	.	.																.	.	.	.	.
Alig confidence																	.	.										.							.	.	.	.	.	.	.											.	.	.	.				.	.	.																.	.	.	.	.
Template Conservation																	.	.										.
Template Sequence		P	G	S	V	L	I	G	F	L	A	P	R	T	Q	P	.	.	E	L	A	S	R	L	R	I	A	.	D	V	T	A	F	A	M	E	S	I	P	R	I	S	R	A	Q	T	M	D	A	L	S	S	Q	A	N	V	A	G	Y	K	A	V	L	L	G	A	S	L	S	T	R	F	V	P	M	L	T	T	A	A	G
Template Known Secondary structure		T	T									T	T	T			.	.									T	.	T						G	G	G			S	S	G	G	G	G	G	G																							S	S		S	S					S	S
Template Predicted Secondary structure																	.	.										.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
							189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	.	.	.	.	.	.	.	.	.	T	L	D	D	V	I
Query Conservation		.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																								.	.	.								.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.								.	.	.	.	.	.	.
Template Sequence		T	V	K	P	A	S	A	L	V	L	G	V	G	V	A	G	L	Q	A	L	A	T	A	K	R	L	G	A	.	.	.	K	T	T	G	Y	D	V	.	.	.	.	.	.	.	R	P	E	V	A	E	Q	V	R	S	V	G	A	Q	W	L	D	L	G	S	E	A	E	R	A	Q	Q	Q	Q	A	L	E	D	A	I
Template Known Secondary structure												S		S														T		.	.	.							S	.	.	.	.	.	.	.	S	G	G	G							T	T
Template Predicted Secondary structure																														.	.	.								.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.		.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure													.			.	.	.	.	.
Query SS confidence													.			.	.	.	.	.
Query Sequence		E	G	A	D	I	F	L	G	C	S	G	.	P	K	.	.	.	.	.	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A
Query Conservation													.			.	.	.	.	.
Alig confidence													.			.	.	.	.	.
Template Conservation
Template Sequence		T	K	F	D	I	V	I	T	T	A	L	V	P	G	R	P	A	P	R	L	V	T	A	A	A	A	T	G	M	Q	P	G	S	V	V	V	D	L	A
Template Known Secondary structure		T	T		S									T	T	S						B							T	S		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions