Job Description P76558 Confidence 96.76% Date Thu Jan 5 12:24:36 GMT 2012 Rank 75 Aligned Residues 161 % Identity 14% Template c3o8qB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae Resolution 1.45 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D
Query Conservation
Alig confidence																																									.	.									.	.	.	.																	.	.
Template Conservation																																									.	.									.	.	.	.																	.	.
Template Sequence		G	L	V	Q	D	L	L	A	Q	Q	V	L	L	K	G	A	T	I	L	L	I	G	A	G	G	A	A	R	G	V	L	K	P	L	L	D	Q	Q	P	.	.	A	S	I	T	V	T	N	R	.	.	.	.	T	F	A	K	A	E	Q	L	A	E	L	V	A	A	Y	G	.	.	E	V	K	A	Q	A	F	E	Q
Template Known Secondary structure										T	T				T	T									S												T	T			.	.	S							S	.	.	.	.	S											T	G	G	G	S	.	.							G	G	G
Template Predicted Secondary structure																																									.	.									.	.	.	.																	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	I	E	G	A	D	I	F	L	G	C	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A	.	N	P	E	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I	I	C	T	G	R	S	D	Y	P	N	Q	V	N	N	V	L	C	F	P	F	I	F	R	G	A
Query Conservation																																					.
Alig confidence																								.													.																					.	.		.	.	.	.	.	.	.
Template Conservation																								.																																		.	.		.	.	.	.	.	.	.
Template Sequence		L	K	Q	S	Y	D	V	I	I	N	S	T	S	G	E	L	P	A	I	D	P	V	.	I	F	S	S	R	S	V	C	Y	D	M	M	Y	G	K	G	Y	T	V	F	N	Q	W	A	R	Q	H	G	C	A	Q	A	I	.	.	D	.	.	.	.	.	.	.	G	L	G	M	L	V	G	Q	A	A	E	S	F	M
Template Known Secondary structure				S			S															G	G	.	G			T	T						S				S	S											T	T		S				.	.		.	.	.	.	.	.	.	T
Template Predicted Secondary structure																								.																																		.	.		.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.								.	.	.	240	.	.	.	.	.	.	.	.	.	250
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	V	G	A	T	A	I	N	E	E	M	K	L	A	A	V	R	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	W	R	G	L	R	P	G	T	K	Q	I	L	R	E	L	R	K	N	L
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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