Job Description P76558 Confidence 97.48% Date Thu Jan 5 12:24:36 GMT 2012 Rank 55 Aligned Residues 180 % Identity 18% Template c3k8zD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis Resolution 2.40 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.														160	.	.
Predicted Secondary structure																					.												.	.	.										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.												.	.	.										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	I	D	V	F	D	I	E	V	D	E	L	D	P	D	K	F	I	.	E	V	V	A	A	L	E	P	T	F	G	.	.	.	G	I	N	L	E	D	I	K	A	.	.	P	E	C	F	Y	I	E	Q	K	L	R	E	R	M	N	I	P	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	D
Query Conservation																					.												.	.	.										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.												.	.	.										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	I	V	C	D	P	R	D	M	S	F	R	E	L	E	R	L	S	R	G	Y	V	R	A	I	S	Q	I	V	G	P	T	K	D	V	P	A	P	D	V	F	T	N	S	Q	I	M	A	W	M	M	D	E	Y	S	R	I	D	E	F	N	S	P	G	F	I	T	G	K	P	L	V	L	G	G	S	H	G	R
Template Known Secondary structure								G	G	G	S																	G	G	G		B	T	T	T					B		T	T																		T	S			G	G	G	S	S	S			G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V
Query Conservation
Alig confidence																																																			.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		E	S	A	T	A	K	G	V	T	I	C	I	K	E	A	A	K	K	R	G	I	D	I	K	G	A	R	V	V	V	Q	G	F	G	N	A	G	S	Y	L	A	K	F	M	H	D	A	G	A	.	.	K	V	V	G	I	S	D	A	Y	G	G	L	Y	D	P	E	G	L	D	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T																	T	T			G	G	G									S	S												T	T		.	.								S	S						T	T					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A	N	P	E	.	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I	I
Query Conservation																																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.			.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	D	I	L	V	P	A	A	I	E	N	Q	I	T	E	E	N	A	H	N	I	R	A	K	I	V	V	E	A	A	N	G	P	T	T	L	E	.	.	G	T	K	I	L	S	D	R	D	I	L	L	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.									S		S		S	B		T	T	T	G	G	G				S						S	S	S		B				.	.								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template SS confidence
															265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions