Return to main results Retrieve Phyre Job Id

Job DescriptionP76558
Confidence96.16%DateThu Jan 5 12:24:36 GMT 2012
Rank104Aligned Residues109
% Identity11%Templatec3hg7A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   164.....170.........180 .........190.........200.........210.........220.......
Predicted Secondary structure 
................

















Query SS confidence 
















. . . . . . . . . . . . . . . .














































Query Sequence  HGTAIISTAAILNGLRV. . . . . . . . . . . . . . . . VEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQ
Query Conservation 



 
 




 


 ................ 
  
 
  

  





 


 

   
     
   
  


  
Alig confidence 
















................






























...












Template Conservation    


  
 


   
             
       
 
 





 
 

  

  
   
 ... 
           
Template Sequence  PLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM. . . KVLGVSRSGRERA
Template Known Secondary structure  TTTT








STT


STT
...
SS



T
Template Predicted Secondary structure 






















...




Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.... .....170.......
 
   228.230.........240.........250.........260... ......270.........280.......
Predicted Secondary structure 


















.....












Query SS confidence 



































. . . . .























Query Sequence  GREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGC. . . . . SGPKVLTQEMVKKMARAPMILALA
Query Conservation   
   
   
   
        
 
 
    



 .....
  
 

 
 
  

  






Alig confidence 





............

















.....























Template Conservation        ............    
 


  



    


  
  

    
  

 

 




Template Sequence  GFDQVY. . . . . . . . . . . . QLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVG
Template Known Secondary structure  T
S............
GGGT
S




SSSTTSB
TTTTT
S
TT

S
Template Predicted Secondary structure 


............

























Template SS confidence 
































































   178.180... ......190.........200.........210.........220.........230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions