Job Description P76558 Confidence 80.91% Date Thu Jan 5 12:24:36 GMT 2012 Rank 419 Aligned Residues 122 % Identity 21% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	.	.	.	.	.	.	.	.	.	.	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	A	A	L	E	R	L	G	K	K	M	D	G	S	K	V	A	M	L	G	W	A	F	I	K	D	S	D	D	A	R	N	T	P	S	E	P	Y	R	D	L	C	L	K	A	G	A	.	.	.	S	V	M	V	H	D	P	Y	V	V	N	Y	P	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T			S	T	T								S	S	S	S	T	T		S			T	T		T												T		.	.	.							S	S				B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.				.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.												.	.
Query SS confidence																								.	.	.												.	.
Query Sequence		D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	G	.	.	.	P	K	V	L	T	Q	E	M	V	K	K	.	.	M	A	R	A	P	M	I	L	A	L	A	N	P	E	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I	I	C	T	G	R	S	D	Y	P	N	Q
Query Conservation																								.	.	.												.	.
Alig confidence		.	.																					.	.	.												.	.									.	.	.															.
Template Conservation		.	.																																													.	.	.															.
Template Sequence		.	.	I	S	D	N	L	E	E	V	V	R	N	A	D	A	I	V	V	L	A	G	H	S	A	Y	S	S	L	K	A	D	W	A	K	K	V	S	A	K	A	N	P	V	I	I	.	.	.	D	G	R	N	V	I	E	P	D	E	F	I	G	K	.	G	F	V	Y	K	G	I	G	R	E	G	H	H	H	H
Template Known Secondary structure		.	.			S							T	T		S						S							S													S	S					.	.	.		S	S	S		S							T	T	.	T						T	T		T	T	T	T	T
Template Predicted Secondary structure		.	.																																													.	.	.															.
Template SS confidence
				404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.				.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions