Job Description P76558 Confidence 83.75% Date Thu Jan 5 12:24:36 GMT 2012 Rank 350 Aligned Residues 99 % Identity 11% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		183	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.
Predicted Secondary structure														.																																																							.	.	.	.	.	.
Query SS confidence														.																																																							.	.	.	.	.	.
Query Sequence		K	N	I	S	D	V	R	M	V	V	S	G	.	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	.	.	.	.	.	.	T	L	D	D	V	I	E
Query Conservation														.																																																							.	.	.	.	.	.
Alig confidence														.																			.									.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																	.									.	.	.	.	.	.	.
Template Sequence		S	Y	L	T	E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	.	P	N	L	C	L	Y	D	P	.	.	.	.	.	.	.	F	A	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L	T	F	T	S	D	I	K	E	A	L	T
Template Known Secondary structure				S		S	S						S	T	T	S													T	T			.	S							S	.	.	.	.	.	.	.																		T	T							S							T
Template Predicted Secondary structure																																	.									.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		256	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		G	A	D	I	F	L	G	C	S	G	P	.	.	.	.	.	.	.	.	K	V	L	T	Q	E	M	V	K	K	M	A	.	.	.	.	R	A	P	M	I	L	A	L	A	N	P
Query Conservation													.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		D	A	K	Y	I	V	S	S	G	G	T	R	E	D	L	L	K	G	N	A	E	I	A	A	Q	L	G	K	D	I	K	S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P
Template Known Secondary structure		T																																		T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions