Return to main results Retrieve Phyre Job Id

Job DescriptionP76558
Confidence97.74%DateThu Jan 5 12:24:36 GMT 2012
Rank47Aligned Residues142
% Identity12%Templatec3aogA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  HDDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAA
Query Conservation 







 
 




 


  
  
 
  

  





 


 

   
     
   
  


   
   
   
  
Alig confidence 



















































..














..








Template Conservation       


 

              
 
  




 
 

   
  
   

..






  
 


 .. 


   
 
Template Sequence  LGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGA. . RVVAVQDHTGTVYNE. . AGIDPYDLL
Template Known Secondary structure  TT
TTT

STT


STT
..
SS

T..T


Template Predicted Secondary structure 

















..




..



Template SS confidence 















































































   192.......200.........210.........220.........230.........240... ......250........ .260.......
 
   240..... ....250..... ....260.........270.........280.........290 .........300.......
Predicted Secondary structure 


.........




.



















.







Query SS confidence 





. . . . . . . . .









.


































.
















Query Sequence  YAVVDD. . . . . . . . . GKRTLDDVIE. GADIFLGCSGPKVLTQEMVKKMARAPMILALANPE. PEILPPLAKEVRPDAII
Query Conservation   
    .........    
 
 
 .   



 
  
 

 
 
  

  









. 
  

 
    
  
 
Alig confidence 





.........









.


































.

..












Template Conservation          
     
  
    

    






    
   

  
 








 
 
 
..
  

  


 
 
Template Sequence  RHVQEFGGVRGYPKAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRIRARIVAEGANGPTTPA. . ADDILLEKGVLVV
Template Known Secondary structure  TSSSTT
TTS

TT


S
SSSS
B
TTTGGG


S

SSS
B
..T
Template Predicted Secondary structure 



































..


Template SS confidence 














































































   268.270.........280.........290.........300.........310.........320.........330. ........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions