Job Description P76558 Confidence 94.69% Date Thu Jan 5 12:24:36 GMT 2012 Rank 157 Aligned Residues 127 % Identity 20% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	K	L	R	E	R	M	N	I	P	V	F	H	D	D	Q	.	.	.	H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A
Query Conservation																			.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.										.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		L	D	A	L	N	E	R	.	G	V	A	F	A	N	S	R	G	A	G	D	T	A	T	S	D	L	A	L	Y	L	I	L	S	V	F	R	L	A	S	Y	S	E	R	A	A	R	T	G	D	P	E	T	F	N	R	V	H	L	E	I	G	K	S	A	H	N	P	R	G	H	V	L	G	A	V	G	L	G	A	I
Template Known Secondary structure								T	.	T							T	T	T	T																		T									T	T														T	T	T				S	T	T	S								S
Template Predicted Secondary structure									.
Template SS confidence
		96	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		199	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.						.	.	.	.	.	270	.	.
Predicted Secondary structure								.																																																													.	.	.	.	.
Query SS confidence								.																																																													.	.	.	.	.
Query Sequence		A	I	A	C	M	N	.	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	.	.	.	.	.	G	P	K	V	L	T	Q	E
Query Conservation								.																																																													.	.	.	.	.
Alig confidence								.								.	.	.									.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation																.	.	.									.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	E	I	A	R	K	A	V	H	G	L	G	M	.	.	.	K	L	V	Y	Y	D	V	A	.	.	.	.	.	.	.	.	.	.	P	A	D	A	E	T	E	K	A	L	G	A	E	R	V	D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H	L	I	D	E	A
Template Known Secondary structure												T	T			.	.	.							S	S	.	.	.	.	.	.	.	.	.	.											T					S	S									S									S	G	G	G	T	T		B
Template Predicted Secondary structure																.	.	.									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	K	K	M	A	R	A	P	M	I	L	A	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	A	A	M	K	P	G	S	R	I	V	N	T	A
Template Known Secondary structure						S		T	T							S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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