Job Description P76558 Confidence 95.40% Date Thu Jan 5 12:24:36 GMT 2012 Rank 129 Aligned Residues 181 % Identity 17% Template c2pi1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase from aquifex2 aeolicus complexed with nad and lactic acid Resolution 2.12 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		E	S	V	A	E	H	T	F	A	X	I	L	T	L	V	K	R	L	K	R	I	E	D	R	V	K	K	L	N	F	S	Q	D	S	E	I	L	A	R	E	L	N	R	L	T	L	G	V	I	G	T	G	R	I	G	S	R	V	A	X	Y	G	L	A	F	G	X	.	.	.	K	V	L	C	Y	D	V	V	K	R
Template Known Secondary structure																	T	T										T	T						G	G	G					G	G	G	S								S													T	T		.	.	.							S	S
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.																												.	.
Query SS confidence																																									.	.	.	.	.																												.	.
Query Sequence		I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	.	.	.	.	.	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A	N	P	E	.	.	P	E	I	L	P	P	L
Query Conservation																																									.	.	.	.	.																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	K	E	K	G	C	V	Y	T	S	L	D	E	L	L	K	E	S	D	V	I	S	L	H	V	P	Y	T	K	E	T	H	H	X	I	N	E	E	R	I	S	L	X	K	D	G	V	Y	L	I	N	T	A	R	G	K	V	V	D	T	D	A	L	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.							T														S										T	T	T	T	T		B								S		T	T							S		G	G	G	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.																										.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	E	V	R	P	D	A	I	I	C	T	G	R	S	D	Y	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	N	N	V	L	C	F	P	F	I	F	R	G	A	L	D	V	G	A	T	A	I	N	E	E	M	K	L	A	A	V	R	A	I	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation						.	.																																																			.	.	.	.	.
Template Sequence		A	Y	Q	R	.	.	G	K	F	S	G	L	G	L	D	V	F	E	D	E	E	I	L	I	L	K	K	Y	T	E	G	K	A	T	D	K	N	L	K	I	L	E	L	A	C	K	D	N	V	I	I	T	P	H	I	A	.	.	.	.	.	Y	Y	T	D	K	S	L	E	R	I	R	E	E	T	V	K	V	V	K
Template Known Secondary structure					T	.	.	T								S			T	T						T	T	G	G	G	G	T														T	S	T	T						S		T	.	.	.	.	.	T		S
Template Predicted Secondary structure						.	.																																																			.	.	.	.	.
Template SS confidence
		243	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	H	A	E	Q	S	E	V	V	A	S	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	V	K	G	D	L	E	Q	I	K	G	N	F	V
Template Known Secondary structure					S	S		T	T	T	T	G	G	G	B	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions