 |
Job Description | P76558 | Confidence | 95.83% | Date | Thu Jan 5 12:24:36 GMT 2012 |
Rank | 118 | Aligned Residues | 106 |
% Identity | 18% | Template | c2o4cB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:erythronate-4-phosphate dehydrogenase; |
PDBTitle: crystal structure of d-erythronate-4-phosphate dehydrogenase complexed2 with nad
|
Resolution | 2.30 Å |
|
 |
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | T | A | I | I | S | T | A | A | I | L | N | G | L | R | V | V | E | K | N | I | S | D | V | R | M | V | V | S | G | A | G | A | A | A | I | A | C | M | N | L | L | V | A | L | G | L | Q | K | H | N | I | V | V | C | D | S | K | G | V | I | Y | Q | G | R | E | P | N | M | A | E | T | K | A | A | Y | A | V | V |
Query Conservation |   |
|
|
|
|   |
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |
|
|
|   | . | . | . |   |
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
Template Sequence |   |
R | G | V | V | D | Y | V | L | G | C | L | L | A | M | A | E | V | R | G | A | D | L | A | E | R | T | Y | G | V | V | G | A | G | Q | V | G | G | R | L | V | E | V | L | R | G | L | G | W | . |
. |
. |
K | V | L | V | C | D | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | R | Q | A | R | E | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
|
. | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 150 | . | . | . | . |
  |
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | G | K | R | T | L | D | D | V | I | E | G | A | D | I | F | L | G | C | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | K | V | L | T | Q | E | M | V | K | K | M | A | R | A | P | M | I | L | A | L | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|
|
|
|   |
| . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
Template Sequence |   |
D | G | E | F | V | S | L | E | R | L | L | A | E | A | D | V | I | S | L | H | T | P | L | N | R | D | G | E | H | P | T | R | H | L | L | D | E | P | R | L | A | A | L | R | P | G | T | W | L | V | N | A | S |
Template Known Secondary structure |   |
S | S |
|
|
|
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
|
|
| S | S | S | S | S |
|
| T | T | S | B |
|  |  |  |  |  | T | S |
| T | T |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|