Job Description P76558 Confidence 98.47% Date Thu Jan 5 12:24:36 GMT 2012 Rank 31 Aligned Residues 235 % Identity 17% Template c2hi1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2; PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium. Resolution 2.30 Å

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		443	.	.	.	.	.	.	450	.	.						.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490													.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																															.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.																															.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	V	V	L	P	E	G	E	E	.	.	.	.	.	A	R	V	L	H	A	T	Q	E	L	V	T	L	G	L	A	K	P	I	L	I	G	R	P	N	V	I	E	M	R	.	I	Q	K	L	G	L	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	V	D	F	E	I	V	N	N	E	S	D
Query Conservation												.	.	.	.	.																															.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.															.																.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		K	T	V	A	I	T	X	G	D	P	A	G	I	G	P	E	I	I	V	K	A	L	S	E	D	G	L	N	G	.	A	P	L	V	V	I	G	C	L	A	T	L	K	R	L	Q	A	K	G	I	T	P	N	V	E	L	R	A	I	E	R	V	A	E	A	R	F	A	P	G	I	I	H	V	I	D	E	P	L	A
Template Known Secondary structure											T	T	T	T										T	S	T	T	T	T	T	.		S																T	T	S	S									S	S	G	G	G					T	T										S
Template Predicted Secondary structure																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.										.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.
Query Sequence		P	R	F	K	E	Y	W	T	E	Y	F	Q	I	M	K	R	R	G	V	T	Q	E	Q	A	Q	R	A	L	I	S	N	P	T	V	I	G	A	I	M	V	Q	R	G	E	A	D	A	M	I	C	G	T	V	G	D	Y	H	E	H	F	S	.	.	.	.	.	.	.	.	.	V	V	K	N	V	F	G	Y	R	D
Query Conservation																																																															.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																			.																																.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		Q	.	.	.	.	.	.	.	.	.	.	P	E	A	L	E	A	G	K	V	Q	A	Q	A	G	D	L	A	Y	.	R	C	V	K	R	A	T	E	L	A	L	R	G	D	V	Q	A	I	A	T	A	P	L	N	K	E	A	L	H	L	A	G	H	N	Y	P	G	H	T	E	L	L	A	T	L	T	H	S	R	D
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	G	G	G			T	T	S											.												T	T	S		S															T	T				S	S									T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		83											.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.									.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.		.	.	.	630	.	.	.					.	.	.	.	.	.	640	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.																							.								.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.																							.								.	.	.	.
Query Sequence		G	V	H	T	A	G	A	M	N	A	L	L	L	P	S	G	N	T	F	I	A	D	T	Y	V	N	D	E	P	.	.	.	.	.	.	.	.	D	A	E	E	L	A	E	I	T	L	M	A	A	E	T	V	R	R	F	G	I	E	.	P	R	V	A	L	L	S	.	.	.	.	H	S	N	F	G	S	S	D	C
Query Conservation																															.	.	.	.	.	.	.	.																							.								.	.	.	.
Alig confidence		.	.	.	.	.	.																				.	.	.		.	.	.	.	.	.	.	.																							.								.	.	.	.
Template Conservation		.	.	.	.	.	.																				.	.	.
Template Sequence		.	.	.	.	.	.	Y	A	X	V	L	Y	T	D	K	L	K	V	I	H	V	S	T	H	I	.	.	.	A	L	R	K	F	L	D	T	L	S	T	A	R	V	E	T	V	I	G	I	A	D	T	F	L	K	R	V	G	Y	V	K	P	R	I	A	V	A	G	V	N	P	H	A	G	E	N	G	L	F	G	D
Template Known Secondary structure		.	.	.	.	.	.								S	S						S			S	S	.	.	.																												T	T		S	S								S	S	G	G	G	S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.																				.	.	.
Template SS confidence
								152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	S	S	K	M	R	Q	A	L	E	L	V	R	E	R	A	P	E	L	M	I	D	G	E	M	H	G	D	A	A	L	V	E	A	I	R	N	D	R	M	P	D	S	S	L	K	G	S	A	N	I	L	V	M	P	N	M	E	A	A	R	I	S	Y	N	L	L
Query Conservation
Alig confidence																		.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	T	R	I	L	T	P	A	I	T	D	A	R	A	K	.	.	G	X	D	V	Y	G	P	C	P	P	D	T	V	F	L	Q	A	Y	.	.	.	.	.	.	.	.	.	.	E	G	Q	Y	D	X	V	V	A	X	Y	H	D	Q	G	H	I	P	L	K	L	L
Template Known Secondary structure						T										T	T	.	.	T																		.	.	.	.	.	.	.	.	.	.	T	T	S		S					S	S
Template Predicted Secondary structure																		.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.											.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions