Job Description P76558 Confidence 84.41% Date Thu Jan 5 12:24:36 GMT 2012 Rank 334 Aligned Residues 227 % Identity 19% Template c2ep9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase; PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form) Resolution 1.85 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		D	V	L	I	V	G	S	G	L	V	G	R	S	W	A	M	L	F	A	S	G	G	F	.	.	.	R	V	K	L	Y	D	I	E	P	R	Q	I	T	G	A	L	E	N	I	R	K	E	M	K	S	L	Q	Q	S	G	S	L	K	G	S	L	S	A	E	E	Q	L	S	L	I	S	S	C	T	N	L	A	E	A
Template Known Secondary structure									S													T	T		.	.	.							S																						T	T				S	S	S								T					S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
					222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																										.	.												.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																										.	.												.	.	.	.	.	.	.
Query Sequence		.	.	.	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	.	.	R	A	P	M	I	L	A	L	A	N	P	.	.	.	.	.	.	.
Query Conservation		.	.	.																																																										.	.												.	.	.	.	.	.	.
Alig confidence		.	.	.																						.	.	.	.	.	.	.	.																													.	.												.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		V	E	G	V	V	H	I	Q	E	C	V	P	E	N	L	D	L	K	R	K	I	F	A	Q	.	.	.	.	.	.	.	.	L	D	S	I	V	D	D	R	V	V	L	S	S	S	S	S	C	L	L	P	S	K	L	F	T	G	L	A	H	V	K	Q	C	I	V	A	H	P	V	N	P	P	Y	Y	I	P	L	V
Template Known Secondary structure		T	T	T		S								S												.	.	.	.	.	.	.	.			T	T			S	S								S	S								T	T		T	T	G	G	G								S	S	T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
									290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.												.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.												.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	E	P	E	I	L	P	P	L	A	K	E	.	.	.	V	R	P	D	A	I	I	C	T	G	R	S	D	Y	P	N	Q	V	N	N	V	L	C	F	P	F	I	F	R	G	A	L	D	V	G	A	T	A	I	N	E	E	M	K	L	A	A	V	R	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.												.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.												.	.	.											.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		E	L	V	P	H	P	E	T	S	P	A	T	V	D	R	T	H	A	L	M	R	K	I	G	Q	S	P	V	R	V	L	.	K	E	I	D	G	F	V	L	N	R	L	Q	Y	A	I	I	S	E	A	W	R	L	V	E	E	G	I	V	S	P	S	D	L	D	L	V	M	S	D	G	L	G	M	R	Y	A	F	I
Template Known Secondary structure							T	T																T	T							S	.	S			T	T	T	T																		T	T	S	S											T	T						T	T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
					350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	I	A	E	L	A	H	A	E	Q	S	E	V	V	A	S	A	Y	G	D	Q	D	L	S	F	G	P	E	Y	I	I	P	K	P	F	D	P	R	L	I	V	K	I	A	P	A	V	A	K	A	A	M	E	S	G	V	A	T	R	P	I	A	D	F	D	V	Y	I	D	K	L	T	E	F	V	Y	K
Query Conservation		.	.	.
Alig confidence		.	.	.																																					.	.	.	.	.										.										.
Template Conservation																																									.	.	.	.	.										.										.
Template Sequence		G	P	L	E	T	M	H	L	N	A	E	G	M	L	S	Y	S	D	R	Y	S	E	G	M	K	R	V	L	K	S	F	G	S	I	P	E	F	S	G	.	.	.	.	.	A	T	V	E	K	V	N	Q	A	.	M	C	K	K	V	P	A	D	P	.	E	H	L	A	A	R	R	E	W	R	D	E	C	L	K	R
Template Known Secondary structure										T	T	T	S																		T										.	.	.	.	.										.					S		S	S		.
Template Predicted Secondary structure																																									.	.	.	.	.										.										.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	L	F	M	K	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	L	K	R	Q	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions