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Job DescriptionP76558
Confidence94.77%DateThu Jan 5 12:24:36 GMT 2012
Rank155Aligned Residues121
% Identity19%Templatec2e37B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure of tt0471 protein from thermus thermophilus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  VRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPK
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Template Sequence  XKVGIVGSGXVGSATAYALALLGVA. REVVLVDLDRKLAQAHAEDILHAT. PFAHPVWVRAGSYGDLEGARAVVLAAGVA
Template Known Secondary structure 


STT

.S
SSTTG.GGS




GGGGTT
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   1........10.........20..... ....30.........40......... 50.........60.........70........
 
   268.270 ........ .280.........290.........300 .........310
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Query Sequence  VLT. . . . . . . . . QEMVKKMA. . . RAPMILALANPEPEILPPLAKE. . VRPDAIICTG
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Template Sequence  RLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVXTQVAYRLSGLPPGRVVGSG
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TT

SSS
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GGG
T
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   85....90.........100.........110.........120.........130.........140.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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