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Job DescriptionP76558
Confidence97.51%DateThu Jan 5 12:24:36 GMT 2012
Rank53Aligned Residues144
% Identity16%Templatec2bmaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  HDDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAA
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Template Sequence  NLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHLNV. . KVLTLSDSNGYVYEPNGFTHENLEFL
Template Known Secondary structure  TTTTTTTT

GGG

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TT
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   203......210.........220.........230.........240.........250.... .....260.........270.........280
 
   240.........250...... ...260.........270.........280 ......... 290.........
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Query Sequence  YAVVDDGKRTLDDVIEG. . . . . . . . . . . . . . . . ADIFLGCSGPKVLTQEMVKKMARA. . PMILALANP. . EPEILPPLAK
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Template Sequence  IDLKEEKKGRIKEYLNHSSTAKYFPNEKPWGVPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVD. . AINLF
Template Known Secondary structure  TTTT

GGGGGGT
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   281........290.........300.........310.........320.........330.........340.........350... .....
 
   300.......
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Query Sequence  EVRPDAII
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Template Sequence  KSNNIIYC
Template Known Secondary structure  TT
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   359360......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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