Job Description P76558 Confidence 100.00% Date Thu Jan 5 12:24:36 GMT 2012 Rank 7 Aligned Residues 362 % Identity 30% Template c2aw5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadp-dependent malic enzyme; PDBTitle: crystal structure of a human malic enzyme Resolution 2.50 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.														.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.											.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.											.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	L	A	Y	S	P	G	V	A	A	P	C	L	.	.	.	E	I	E	K	D	P	L	K	A	Y	.	K	Y	T	A	R	G	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	V	I	S	N	G	T	A	V	L	G	L	G	N	I	G	A	L	A	G	K	P	V	M	E	G	K	G	V	L
Query Conservation																.	.	.											.									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.											.									.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																					.
Template Sequence		M	P	I	V	Y	T	P	T	V	G	L	A	C	Q	Q	Y	S	L	V	F	R	K	P	R	G	L	F	I	T	I	H	D	R	G	H	I	A	S	V	L	N	A	W	P	E	D	V	I	K	A	I	V	V	T	D	G	E	R	I	L	G	L	G	D	L	G	C	.	N	G	M	G	I	P	V	G	K	L	A	L
Template Known Secondary structure						S	T	T								T							S			S					G	G	G	T	T							T	T	S	S		S										S	S		B	T	T	T	B			G	G	.	G	G	G
Template Predicted Secondary structure																																																																					.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.
		98	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.																								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	K	F	A	G	I	D	.	.	.	.	.	.	.	V	F	D	I	E	V	D	E	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	K	F	I	E	V	V	A	A	L	E	P	T	F	G	G	I	N	L	E	D	I	K	A	P	E	C	F	Y	I	E
Query Conservation										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	A	C	G	G	M	N	P	Q	E	C	L	P	V	I	L	D	V	G	T	E	N	E	E	L	L	K	D	P	L	Y	I	G	L	R	Q	R	R	V	R	G	S	E	Y	D	D	F	L	D	E	F	M	E	A	V	S	S	K	Y	G	M	N	C	L	I	Q	F	E	D	F	A	N	V	N	A	F	R	L	L
Template Known Secondary structure										G	G	G																			T	T			S		S	S																									T	T							S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.
Query Sequence		Q	K	L	R	E	R	M	N	I	P	V	F	H	D	D	Q	H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	.	.	.	.	.	.	.	.	H	N	I	V	V	C
Query Conservation																																																																				.	.	.	.	.	.	.	.
Alig confidence								.	.																																																											.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		N	K	Y	R	N	Q	.	.	Y	C	T	F	N	D	D	I	Q	G	T	A	S	V	A	V	A	G	L	L	A	A	L	R	I	T	K	N	K	L	S	D	Q	T	I	L	F	Q	G	A	G	E	A	A	L	G	I	A	H	L	I	V	M	A	L	E	K	E	G	L	P	K	E	K	A	I	K	K	I	W	L	V
Template Known Secondary structure					T	T	T	.	.	S	S				T	T	T																			T	S		G	G	G							B		S																		T								T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		257	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290			.
Predicted Secondary structure																																						.	.											.														.	.	.													.	.
Query SS confidence																																						.	.											.														.	.	.													.	.
Query Sequence		D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	.	.	G	A	D	I	F	L	G	C	S	G	.	P	K	V	L	T	Q	E	M	V	K	K	M	A	.	.	.	R	A	P	M	I	L	A	L	A	N	P	E	.	.	P
Query Conservation																																						.	.											.														.	.	.													.	.
Alig confidence													.	.	.	.	.	.																				.	.											.														.	.	.													.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		D	S	K	G	L	I	V	K	G	Q	E	.	.	.	.	.	.	K	E	K	F	A	H	E	H	E	E	M	K	N	L	E	A	I	V	Q	E	I	K	P	T	A	L	I	G	V	A	A	I	G	G	A	F	S	E	Q	I	L	K	D	M	A	A	F	N	E	R	P	I	I	F	A	L	S	N	P	T	S	K	A
Template Known Secondary structure			T	T				B					.	.	.	.	.	.	G	G	G	G		B	S																	S						S	S		T	T		S													S	S								S	S	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.							.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310												.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	L	P	P	L	A	K	.	E	V	R	P	D	A	I	I	C	T	G	.	.	.	.	.	.	.	.	.	.	.	R	S	D	Y	P	N	Q	V	N	N	V	L	C	F	P	F	I	F	R	G	A	L	D	V	G	A	T	A	I	N	E	E	M	K	L	A	A	V	R	A	I	A	E	L	A	H	A	E	Q
Query Conservation										.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.												.	.	.	.	.	.	.	.	.	.	.																																																	.
Template Conservation																																																																																	.
Template Sequence		E	C	S	A	E	Q	C	Y	K	I	T	K	G	R	A	I	F	A	S	G	S	P	F	D	P	V	T	L	P	N	G	Q	T	L	Y	P	G	Q	G	N	N	S	Y	V	F	P	G	V	A	L	G	V	V	A	C	G	L	R	Q	I	T	D	N	I	F	L	T	T	A	E	V	I	A	Q	Q	V	S	D	K	.
Template Known Secondary structure		S	S									T	T	T							S	S								T	T	S										G	G	G	T												T		S	S																T	S				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																								.	.
Query SS confidence																														.																								.	.
Query Sequence		S	E	V	V	A	S	A	Y	G	D	Q	D	L	S	F	G	P	E	Y	I	I	P	K	P	F	D	P	R	.	L	I	V	K	I	A	P	A	V	A	K	A	A	M	E	S	G	V	A	T	R	P	I	.	.	A	D	F	D	V	Y	I	D	K
Query Conservation																														.																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																.																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	E	E	G	R	L	Y	P	P	L	N	T	I	R	D	V	S	L	K	I	A	E	K	I	V	K	D	A	Y	Q	E	K	T	A	T	V	Y	P	E	P	Q	N	K	E	A	F	V	R	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T		S	S			G	G	G																			T	T				S		S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.