Job Description P76558 Confidence 100.00% Date Thu Jan 5 12:24:36 GMT 2012 Rank 2 Aligned Residues 378 % Identity 48% Template c2a9fB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative malic enzyme ((s)-malate:nad+ PDBTitle: crystal structure of a putative malic enzyme ((s)-2 malate:nad+ oxidoreductase (decarboxylating)) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	D	Q	L	K	Q	S	A	L	D	F	H	E	F	P	V	P	G	K	I	Q	V	S	P	T	K	P	L	A	T	Q	R	D	L	A	L	A	Y	S	P	G	V	A	A	P	C	L	E	I	E	K	D	P	L	K	A	Y	K	Y	T	A	R	G	N	L	V	A	V	I	S	N	G	T	A	V	L	G	L	G
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		L	K	N	Q	L	G	Q	L	A	L	E	Q	A	K	T	F	G	.	G	K	L	E	V	Q	P	K	V	D	I	K	T	K	H	D	L	S	I	A	Y	T	P	G	V	A	S	V	S	S	A	I	A	K	D	K	T	L	A	Y	D	L	T	T	K	K	N	T	V	A	V	I	S	D	G	T	A	V	L	G	L	G
Template Known Secondary structure			T	T	T	T	T	T	T	S								T	.	S	S						S	S			S	S								S	T	T	T												G	G	G					S	G	G	G	T								S	S	S	B	T	T	T	B
Template Predicted Secondary structure																			.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	G	A	L	A	G	K	P	V	M	E	G	K	G	V	L	F	K	K	F	A	G	I	D	V	F	D	I	E	V	D	E	L	D	P	D	K	F	I	E	V	V	A	A	L	E	P	T	F	G	G	I	N	L	E	D	I	K	A	P	E	C	F	Y	I	E	Q	K	L	R	E	R	M	N	I	P	V	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	G	P	E	A	A	M	P	V	M	E	G	K	A	A	L	F	K	A	F	A	G	V	D	A	I	P	I	V	L	D	T	K	D	T	E	E	I	I	S	I	V	K	A	L	A	P	T	F	G	G	I	N	L	E	D	I	S	A	P	R	C	F	E	I	E	Q	R	L	I	K	E	C	H	I	P	V	F	H
Template Known Secondary structure		S																					S	S									S															G	G	G		S						S			T	T											T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	Q	H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y
Query Conservation
Alig confidence																																																					.	.
Template Conservation																																																					.	.
Template Sequence		D	D	Q	H	G	T	A	I	V	V	L	A	A	I	F	N	S	L	K	L	L	K	K	S	L	D	E	V	S	I	V	V	N	G	G	G	S	A	G	L	S	I	T	R	K	L	L	A	A	G	A	.	.	T	K	V	T	V	V	D	K	F	G	I	I	N	E	Q	E	A	A	Q	L	A	P	D	I	A	K	V
Template Known Secondary structure																							T			T	T	T									S														T		.	.	S							T	T					T	T	T				S					G	G	G
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A	N	P	E	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I	I	C	T	G	R	S	D	Y	P	N	Q	V	N	N
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		T	N	R	E	F	K	S	G	T	L	E	D	A	L	E	G	A	D	I	F	I	G	V	S	A	P	G	V	L	K	A	E	W	I	S	K	M	A	A	R	P	V	I	F	A	M	A	N	P	I	P	E	I	Y	P	D	E	A	L	E	A	.	G	A	Y	I	V	G	T	G	R	S	D	F	P	N	Q	I	N	N
Template Known Secondary structure		G	S		T	T						S	S	T	T		T	T		S						S						T	T	T	G	G	G	S		S	S								S	S	S		S	S								T	.	T		S					S		T	T	S	S	S				G
Template Predicted Secondary structure																																																															.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	C	F	P	F	I	F	R	G	A	L	D	V	G	A	T	A	I	N	E	E	M	K	L	A	A	V	R	A	I	A	E	L	A	H	A	E	Q	S	E	V	V	A	S	A	Y	G	D	Q	D	L	S	F	G	P	E	Y	I	I	P	K	P	F	D	P	R	L	I	V	K	I	A	P	A	V
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	A	F	P	G	I	F	R	G	A	L	D	A	R	A	K	T	I	T	V	E	M	Q	I	A	A	A	K	G	I	A	S	L	V	P	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	T	T	N	I	I	P	D	A	F	K	E	G	V	A	E	I	V	A	K	S	V
Template Known Secondary structure		G	G	S											T	T		S																	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			S					S	S										T	T	S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.															360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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