Job Description P76558 Confidence 99.57% Date Thu Jan 5 12:24:36 GMT 2012 Rank 27 Aligned Residues 278 % Identity 15% Template c1yxoB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593 Resolution 2.01 Å

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		444	.	.	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490															.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	V	L	P	E	G	E	.	.	.	.	.	E	A	R	V	L	H	A	T	Q	E	L	V	T	L	G	L	A	K	P	I	L	I	G	R	P	N	V	I	E	M	R	I	Q	K	L	G	L	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	V	D	F	E	I	V	N	N	E	S	D
Query Conservation										.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		R	F	A	L	T	P	G	E	P	A	G	I	G	P	D	L	C	L	L	L	A	R	S	.	.	.	A	Q	P	H	P	L	I	A	I	A	S	R	T	L	L	Q	E	R	A	G	Q	L	G	L	A	I	D	L	K	D	V	S	P	A	A	W	P	E	R	P	A	K	A	G	Q	L	Y	V	W	D	T	P	L	A
Template Known Secondary structure									S	T	T	S	S								G	G	G	S	.	.	.			S	S																			T									B	T	T	B				S				T	T										S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.				.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.							570	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		P	R	F	K	E	Y	W	T	E	Y	F	Q	I	M	K	R	R	G	V	T	Q	E	Q	A	Q	R	A	L	I	S	N	P	T	V	I	G	A	I	M	V	Q	R	G	E	A	D	A	M	I	C	G	T	V	G	D	Y	H	E	H	F	S	V	V	K	N	.	.	.	.	.	.	V	F	G	Y	R	D	G	V	H
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.														.																								.												.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.														.																								.
Template Sequence		A	P	V	R	.	.	.	.	.	.	.	.	.	.	.	.	P	G	Q	L	D	R	A	N	A	A	Y	V	L	.	E	T	L	T	R	A	G	Q	G	C	L	D	G	H	F	A	G	X	I	T	A	P	V	.	H	K	G	V	I	N	E	A	G	I	P	F	S	G	H	T	E	F	L	A	D	L	T	H	T	A
Template Known Secondary structure		S			B	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B			G	G	G						.													T	S		S								.								T	T				S										T	T		S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.														.																								.
Template SS confidence
		1081	.	.	.													.	.	.	.	.	1090	.	.	.	.	.	.	.		.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120		.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.				.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.		.	.	.	.	.		.	.	.	630	.	.	.	.					.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																												.						.									.	.	.	.
Query SS confidence																		.	.	.																												.						.									.	.	.	.
Query Sequence		T	A	G	A	M	N	A	L	L	L	P	S	G	N	T	F	.	.	.	I	A	D	T	Y	V	N	D	E	P	D	A	E	E	L	A	E	I	T	L	M	A	A	E	T	V	R	.	R	F	G	I	E	.	P	R	V	A	L	L	S	H	.	.	.	.	S	N	F	G	S	S	D	C	P	S	S	S	K	M	R
Query Conservation																		.	.	.																												.						.									.	.	.	.
Alig confidence																		.	.	.																												.						.									.	.	.	.
Template Conservation
Template Sequence		Q	V	V	X	X	L	A	T	R	G	L	R	V	A	L	A	T	T	H	L	P	L	R	E	V	A	D	A	I	S	D	E	R	L	T	R	V	A	R	I	L	H	A	D	L	R	D	K	F	G	I	A	H	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	L	G	R	E	E	I	E	V	I	E
Template Known Secondary structure										T	T						S	S		S	S																												T	S			S	S								S	S	G	G	G	G	G	G	G	T	S		S					T
Template Predicted Secondary structure
Template SS confidence
		1147	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	E	L	V	R	E	R	A	P	E	L	M	I	D	G	E	M	H	G	D	A	A	L	V	E	A	I	R	N	D	R	M	P	D	S	S	L	K	G	S	A	N	I	L	V	M	P	N	M	E	A	A	R	I	S	Y	N	L	L	R	V	S	S	S	E	G	V	T	V	G	P	V	L	M	G	V	A	K
Query Conservation
Alig confidence											.	.																			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation											.	.																			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Sequence		P	C	L	E	R	L	R	G	E	.	.	G	L	D	L	I	G	P	L	P	A	D	T	L	F	T	P	K	H	.	.	.	.	.	.	.	.	.	.	L	E	H	C	D	A	V	L	A	X	Y	H	D	Q	G	L	P	V	L	K	Y	K	G	F	G	A	A	V	N	V	T	L	G	.	.	.	.	.	.	.	L
Template Known Secondary structure										T	.	.	T													S	S				.	.	.	.	.	.	.	.	.	.		T	T		S					S	S												T	T	T								T	.	.	.	.	.	.	.	S
Template Predicted Secondary structure											.	.																			.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
		1227	.	.	1230	.	.	.	.	.			.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.											.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.								.
		730	.	.	.	.	.	.													.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	H	V	L	T	P	.	.	.	.	.	.	.	.	.	.	.	.	I	A	S	V	R	R	I	V	N	M	V	A	L	A	V	V	E	A	Q	T	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	I	R	T	S	V	D	H	G	T	A	L	D	L	A	G	S	G	R	I	D	S	G	S	L	Q	V	A	L	E	T	A	Y	Q	X	A	A	S	R
Template Known Secondary structure		S	S						S	S				G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1288	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions