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Job DescriptionP76558
Confidence87.48%DateThu Jan 5 12:24:36 GMT 2012
Rank271Aligned Residues205
% Identity18%Templatec1ygyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170......... 180.........190.........200.........210.........220.......
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Query Sequence  TAIISTAAILNGLR. . . . . . . . . . . . . . . . . . VVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQ
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Template Sequence  AAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGA. . . YVVAYDPYV. . . .
Template Known Secondary structure  TTTT


GGG





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   103......110.........120.........130.........140.........150.........160...... ...170.....
 
   228.230.........240.........250.........260... ......270.........280.........290 .........300
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Query Sequence  GREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGC. . . . . SGPKVLTQEMVKKMARAPMILALANPE. . PEILPPLAKE
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Template Sequence  . . . . . . . . SPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAIT
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STTTTT
B
TTS
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   176...180.........190.........200.........210.........220.........230.........240.......
 
   301........310..... ....320.........330.........340.........350.........360.........370..
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Query Sequence  VRPDAIICTGRSDYP. . . . . . . . NQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDL
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Template Sequence  G. GHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLG. . . . . ASTAEAQDRAGTDVAESVRLALAGEFVPDAVNVGGGVVN
Template Known Secondary structure  T.SSSS
SSSS
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   248 .250.........260.........270.........280.. .......290.........300.........310.........320.
 
   373......380.........390........
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Query Sequence  SFGPEYIIPKPFDPRLIVKIAPAVAK
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Template Sequence  EEVAPW. . . . . . . LDLVRKLGVLAGV
Template Known Secondary structure  TTTTT.......
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   322..... ..330.........340
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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