Job Description P76558 Confidence 92.07% Date Thu Jan 5 12:24:36 GMT 2012 Rank 200 Aligned Residues 207 % Identity 16% Template c1ybaC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: the active form of phosphoglycerate dehydrogenase Resolution 2.24 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	K	L	R	E	R	M	N	I	P	V	F	H	D	D	.	.	.	Q	H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L
Query Conservation																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.									.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		L	D	A	A	A	K	R	.	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	Y	G	H	I	G	T	Q	L	G	I	L
Template Known Secondary structure								T	.	T							S	S	S																		T	T										T	T							T	T				S	T	T									S
Template Predicted Secondary structure									.
Template SS confidence
		91	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	.	.	.	.	.	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A
Query Conservation																																																												.	.	.	.	.
Alig confidence								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	S	L	G	X	.	.	.	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	T	Q	V	Q	H	L	S	D	L	L	N	X	S	D	V	V	S	L	H	V	P	E	N	P	S	T	K	N	X	X	G	A	K	E	I	S	L	X	K	P	G
Template Known Secondary structure					T	T		.	.	.							S	S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S	S									S								S	S	T	T	T	T	T		B								S		T	T
Template Predicted Secondary structure								.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.															190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		281	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310												.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure												.	.																					.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence												.	.																					.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		P	M	I	L	A	L	A	N	P	E	.	.	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I	I	C	T	G	.	.	.	.	.	.	.	.	.	.	.	R	S	D	Y	P	.	N	Q	V	N	N	V	L	C	F	P	F	I	F	R	G	A	L	D	V	G	A	T	A	I	N	E	E	M	K	L	A
Query Conservation												.	.																					.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence												.	.																					.	.	.	.	.	.	.	.	.	.	.						.																					.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		S	L	L	I	N	A	S	R	G	T	V	V	D	I	P	A	L	C	D	A	L	A	S	K	H	L	A	G	A	A	I	D	V	F	P	T	E	P	A	T	N	S	D	P	F	T	S	P	L	C	E	F	D	N	V	L	L	T	P	H	I	G	G	S	T	Q	E	A	Q	.	.	.	.	.	E	N	I	G	L	E
Template Known Secondary structure								S		T	T	S	B											T	T	S										S	S			S	S	T	T	S					G	G	G	G		T	T					S	S		T	T		S					.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	R	A	I	A	E	L	A	H	A	E	Q	S	E	V	V	A	S	A	Y	G	D	Q	D	L	S	F	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	G	K	L	I	K	Y	S	D	N	G	S	T	L	S	A	V	N	F	P	E	V	S	L	P	L	H	G	G
Template Known Secondary structure																T	T		S	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions