Job Description P76558 Confidence 88.94% Date Thu Jan 5 12:24:36 GMT 2012 Rank 248 Aligned Residues 111 % Identity 16% Template c1y6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: l-lactate dehydrogenase from clostridium thermocellum cth-1135 Resolution 3.01 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	.	.	.	.	D	V	I	E	G	A	D	I	F	L	G	C	S
Query Conservation																																																																	.	.	.	.
Alig confidence																										.										.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																										.										.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	I	I	G	A	G	F	V	G	A	S	A	A	F	T	M	A	L	R	Q	T	A	.	N	E	L	V	L	I	D	V	F	.	.	.	.	.	.	.	.	.	.	A	I	G	E	A	M	D	I	N	H	G	L	P	F	M	G	Q	M	S	L	Y	D	Y	S	D	V	K	D	C	D	V	I	V	V	T	A
Template Known Secondary structure									S													T	T		S	.	S									.	.	.	.	.	.	.	.	.	.									T	T	S				T	T							G	G	G	G	T	T		S
Template Predicted Secondary structure																										.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		265	.	.	.	.	270										.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure								.	.	.	.	.	.	.	.	.									.	.	.																							.	.
Query SS confidence								.	.	.	.	.	.	.	.	.									.	.	.																							.	.
Query Sequence		G	P	K	V	L	T	.	.	.	.	.	.	.	.	.	Q	E	M	V	K	K	M	A	.	.	.	R	A	P	M	I	L	A	L	A	N	P	E	P	E	I	L	P	P	L	A	K	E	.	.	V	R	P	D	A	I	I	C	T	G
Query Conservation								.	.	.	.	.	.	.	.	.									.	.	.																							.	.
Alig confidence								.	.	.	.	.	.	.	.	.									.	.	.																							.	.
Template Conservation
Template Sequence		G	A	T	R	L	D	L	A	K	K	N	V	M	I	A	K	E	V	T	Q	N	I	M	K	Y	Y	N	H	G	V	I	L	V	V	S	N	P	V	D	I	I	T	Y	M	I	Q	K	W	S	G	L	P	V	G	K	V	I	G	S	G
Template Known Secondary structure																													S							S	S	S													T			T	T	T					T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions