Job Description P76558 Confidence 96.58% Date Thu Jan 5 12:24:36 GMT 2012 Rank 84 Aligned Residues 127 % Identity 13% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D
Query Conservation
Alig confidence																																									.	.	.								.	.	.	.																	.
Template Conservation																																									.	.	.								.	.	.	.																	.
Template Sequence		G	L	V	T	D	L	Q	R	L	N	W	L	R	P	N	Q	H	V	L	I	L	G	A	G	G	A	T	K	G	V	L	L	P	L	L	Q	A	Q	Q	.	.	.	N	I	V	L	A	N	R	.	.	.	.	T	F	S	K	T	K	E	L	A	E	R	F	Q	P	Y	G	.	N	I	Q	A	V	S	M	D	S	I
Template Known Secondary structure										T	T				T	T								S	S	T	T	T	T	T	T							T	T		.	.	.							S	.	.	.	.	S												G	G	G	S	.							G	G	G
Template Predicted Secondary structure																																									.	.	.								.	.	.	.																	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	I	E	G	A	D	I	F	L	G	C	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A	.	N	P	E	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I	I	C	T	G
Query Conservation																																					.
Alig confidence																										.	.	.									.
Template Conservation																										.	.	.
Template Sequence		P	L	Q	T	Y	D	L	V	I	N	A	T	S	A	A	S	V	D	A	E	I	L	K	L	.	.	.	G	S	A	F	Y	D	M	Q	Y	A	K	G	T	D	T	P	F	I	A	L	C	K	S	L	G	L	T	N	V	S	D	G
Template Known Secondary structure				S		B	S																	T	T	.	.	.	B	S					S				S	S	S											T	T							S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions