Job Description P76558 Confidence 96.14% Date Thu Jan 5 12:24:36 GMT 2012 Rank 105 Aligned Residues 111 % Identity 22% Template c1l7eC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh Resolution 1.90 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	I	S	T	A	A	I	L	N	G	L	R	V	V	E	K	.	.	.	.	.	.	.	.	.	.	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																													.	.	.								.	.	.	.	.	.	.
Template Conservation																																																									.	.	.								.	.	.	.	.	.	.
Template Sequence		N	L	A	G	Y	R	A	V	I	D	G	A	Y	E	F	A	R	A	F	P	M	M	M	T	A	A	G	T	V	P	P	A	R	V	L	V	F	G	V	G	V	A	G	L	Q	A	I	A	T	A	K	R	L	G	A	.	.	.	V	V	M	A	T	D	V	.	.	.	.	.	.	.	R	A	A	T	K	E	Q	V
Template Known Secondary structure																	S	S		S	S					S	S														S													T	T		.	.	.							S	.	.	.	.	.	.	.	S	T	T	S
Template Predicted Secondary structure																																																									.	.	.								.	.	.	.	.	.	.
Template SS confidence
		942	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.				.	.	.	1000	.	.	.								.	.	.	.	.	.	1010	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	.	.	.	.	.	.	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	L	G	G	K	F	I	K	Q	A	E	A	V	L	K	E	L	V	K	T	D	I	A	I	T	T	A	L	I	P	G	K	P	A	P	V	L	I	T	E	E	M	V	T	K	M	K	P	G	S	V	I	I	D	L	A
Template Known Secondary structure		T	T	T	T															T	T		S									T	T	S						S							T	S		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		1012	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions