Job Description P76558 Confidence 91.41% Date Thu Jan 5 12:24:36 GMT 2012 Rank 209 Aligned Residues 239 % Identity 13% Template c1dxyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase Resolution 1.86 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	K	K	F	A	G	I	D	V	F	D	I	E	V	D	E	L	D	P	D	K	F	I	E	V	V	A	A	L	E	P	T	F	G	G	I	N	L	E	D	I	K	A	P	E	C	F	Y	I	E	Q	K	L	R	E	R	M	N	I	P	V	F	H	D	D	Q	H	G	T	A	I	I	S	T	A	A	I	L	N
Query Conservation
Alig confidence																																				.	.												.	.									.
Template Conservation																																				.	.												.	.									.
Template Sequence		T	V	E	W	A	K	G	F	D	G	I	N	S	L	Q	T	T	P	Y	A	A	G	V	F	E	K	M	H	A	Y	G	I	K	F	.	.	L	T	I	R	N	V	G	T	D	N	I	.	.	D	M	T	A	M	K	Q	Y	.	G	I	R	L	S	N	V	P	A	Y	S	P	A	A	I	A	E	F	A	L	T	D
Template Known Secondary structure		G	G	G	G	G	T	T		S							S	S		B											T	T				.	.				S	S	S			T	T	B	.	.								T	.	T							T	T	S
Template Predicted Secondary structure																																				.	.												.	.									.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		177	.	.	180																							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q	K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.															.	.	.	.	.	.
Template Conservation																																																											.	.	.															.	.	.	.	.	.
Template Sequence		T	L	Y	L	L	R	N	M	G	K	V	Q	A	Q	L	Q	A	G	D	Y	E	K	A	G	T	F	I	G	K	E	L	G	Q	Q	T	V	G	V	M	G	T	G	H	I	G	Q	V	A	I	K	L	F	K	G	F	G	A	.	.	.	K	V	I	A	Y	D	P	Y	P	M	K	G	D	H	.	.	.	.	.	.
Template Known Secondary structure							T	T										T	T						T							G	G	G	S								S													T	T		.	.	.							S	S			S	S			.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.															.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.																												.	.
Query SS confidence																															.	.	.	.	.																												.	.
Query Sequence		E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	.	.	.	.	.	S	G	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A	N	P	E	.	.	P	E	I	L	P	P	L	A	K	E	V	R	P	D	A	I	I
Query Conservation																															.	.	.	.	.																												.	.
Alig confidence		.	.	.	.	.	.	.	.																						.	.	.	.	.																												.	.												.
Template Conservation		.	.	.	.	.	.	.	.																																																																			.
Template Sequence		.	.	.	.	.	.	.	.	P	D	F	D	Y	V	S	L	E	D	L	F	K	Q	S	D	V	I	D	L	H	V	P	G	I	E	Q	N	T	H	I	I	N	E	A	A	F	N	L	M	K	P	G	A	I	V	I	N	T	A	R	P	N	L	I	D	T	Q	A	M	L	S	N	L	K	S	.	G	K	L	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T														S										G	G	G	T	T	S	B								S		T	T							S		T	T	S	B											T	.	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																			.
Template SS confidence
										184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.
		308	.	310	.	.	.	.	.																							.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	T	G	R	S	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	V	N	N	V	L	C	F	P	F	I	F	R	G	A	L	D	V	G	A	T	A	I	N	E	E	M	K	L	A	A	V	R	A	I	A	E	L	A	H	A	E	Q	S	E	V	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		V	G	I	D	T	Y	E	Y	E	T	E	D	L	L	N	L	A	K	H	G	S	F	K	D	P	L	W	D	E	L	L	G	M	P	N	V	V	L	S	P	H	I	A	Y	Y	T	E	T	A	V	.	.	.	.	.	H	N	M	V	Y	F	S	L	Q	H	L	V	D	F	L	T	K	G	E	T	S	T	E
Template Known Secondary structure					S	S		T	T												S	S											T		T	T					S	S		T	T		S					.	.	.	.	.																		S			T	T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.						.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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