Job Description P76558 Confidence 97.90% Date Thu Jan 5 12:24:36 GMT 2012 Rank 42 Aligned Residues 136 % Identity 18% Template c1d4fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		148	.	150	.	.	.						.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	L	R	E	R	.	.	.	.	.	M	N	I	P	V	F	H	.	.	.	.	.	.	.	.	.	.	D	D	Q	H	G	T	A	I	I	S	T	A	A	I	L	N	G	L	R	V	V	E	K	N	I	S	D	V	R	M	V	V	S	G	A	G	A	A	A	I	A	C	M	N	L	L	V	A	L	G	L	Q
Query Conservation								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																.	.	.																																		.
Template Conservation																																													.	.	.																																		.
Template Sequence		H	N	L	Y	K	M	M	A	N	G	I	L	K	V	P	A	I	N	V	N	D	S	V	T	K	S	K	F	D	N	L	Y	G	C	R	E	S	L	I	D	G	I	K	.	.	.	R	A	T	D	V	M	I	A	G	K	V	A	V	V	A	G	Y	G	D	V	G	K	G	C	A	Q	A	L	R	G	F	G	A	.
Template Known Secondary structure										T	T				S					S	T	T						T	T	T	T														.	.	.								T	T	S								S														T		.
Template Predicted Secondary structure																																													.	.	.																																		.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		K	H	N	I	V	V	C	D	S	K	G	V	I	Y	Q	G	R	E	P	N	M	A	E	T	K	A	A	Y	A	V	V	D	D	G	K	R	T	L	D	D	V	I	E	G	A	D	I	F	L	G	C	S	G	.	P	K	V	L	T	Q	E	M	V	K	K	M	A	R	A	P	M	I	L	A	L	A	N	P	E	P
Query Conservation																																																							.
Alig confidence		.	.										.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation		.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	R	V	I	I	T	E	I	E	P	.	.	.	.	.	.	.	.	.	.	.	I	N	A	L	Q	A	A	M	E	G	Y	E	V	T	T	M	D	E	A	C	K	E	G	N	I	F	V	T	T	T	G	C	V	D	I	I	L	G	R	H	F	E	Q	M	K	D	D	A	I	V	C	N	I	G	H	F	D	V
Template Known Secondary structure		.	.							S			.	.	.	.	.	.	.	.	.	.	.									T	T										T	T	T		S								S	S		S	B						T	T	S		T	T							S	S	S	S
Template Predicted Secondary structure		.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				237	.	.	240	.	.	.	.	.												.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		292	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	L	P	P	L	A	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	D	V	K	W	L	N	E
Template Known Secondary structure		S	B							T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions