 |
Job Description | P76558 | Confidence | 96.73% | Date | Thu Jan 5 12:24:36 GMT 2012 |
Rank | 79 | Aligned Residues | 85 |
% Identity | 24% | Template | c1a4iB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / |
PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase
|
Resolution | 1.50 Å |
|
 |
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | A | A | I | L | N | G | L | R | V | V | E | K | N | I | S | D | V | R | M | V | V | S | G | A | G | A | . |
A | A | I | A | C | M | N | L | L | V | A | L | G | L | Q | K | H | N | I | V | V | C | D | S | K | G | V | I | Y | Q | G | R | E | P | N | M | A | E | T | K | A | A | Y | A | V | V | D | D | G | K | R |
Query Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|
| . |
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |
| . | . | . |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
Template Sequence |   |
T | P | K | G | C | L | E | L | I | K | E | T | G | V | P | I | A | G | R | H | A | V | V | V | G | R | S | K | I | V | G | A | P | M | H | D | L | L | L | W | N | N | A | . |
. |
. |
T | V | T | T | C | H | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| T | T |
|  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . |  |  |  |  |  |
| T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
. | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 200 |
  |
  |   |
249 | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | |
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | D | D | V | I | E | G | A | D | I | F | L | G | C | S | G | . |
P | K | V | L | T | Q | E | M | V | K | K | M | A | R | A | P | M | I | L |
Query Conservation |   |
  |
|   |
|   |
|   |   |   |   |
|
|
|
|   |
|   | . |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|
| . | . | . |   |
|
|
|
|
|
Template Sequence |   |
H | L | D | E | E | V | N | K | G | D | I | L | V | V | A | T | G | Q | P | E | M | V | K | G | E | W | I | K | . |
. |
. |
P | G | A | I | V | I |
Template Known Secondary structure |   |
S |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
| T | T |
| B |
| G | G | G | S |
| . | . | . | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
| . | . | . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
|
. | 230 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|