Job Description P27294 Confidence 99.70% Date Wed Jan 25 15:20:46 GMT 2012 Rank 153 Aligned Residues 156 % Identity 15% Template c3rgfA_ PDB info PDB header:transferase,transcription Chain: A: PDB Molecule:cyclin-dependent kinase 8; PDBTitle: crystal structure of human cdk8/cycc Resolution 2.20 Å

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		9	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure					.	.	.																													.	.	.	.
Query SS confidence					.	.	.																													.	.	.	.
Query Sequence		E	F	N	.	.	.	H	W	W	A	T	E	G	D	W	V	E	E	P	N	Y	R	R	N	G	M	S	G	V	Q	C	V	E	R	.	.	.	.	N	G	K	K	L	Y	V	K	R	M	T	H	H	L	F	H	S	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K	E	L	E	R	A	G	V
Query Conservation					.	.	.																													.	.	.	.
Alig confidence					.	.	.																													.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.
Template Sequence		D	Y	D	F	K	V	K	L	S	S	E	R	E	R	V	E	D	L	F	E	Y	E	G	C	K	V	G	H	V	Y	K	A	K	R	K	D	G	K	D	D	K	D	Y	A	L	K	Q	I	E	G	T	G	I	.	.	.	.	.	.	.	.	S	M	S	A	C	R	E	I	A	L	L	R	E	L	K	H	P	N	V
Template Known Secondary structure																							S	S												S	S	S	S											S	S	S	S		.	.	.	.	.	.	.	.																	T	T	B
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	P	K	I	V	F	G	E	A	V	K	I	E	G	E	W	R	A	L	L	V	T	E	D	M	A	G	F	I	S	I	A	D	W	Y	A	Q	H	A	V	S	P	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	N	R	Q	H	G	C	C	Y	V	R	H	I	Y	V
Query Conservation
Alig confidence															.	.	.	.																									.	.
Template Conservation															.	.	.	.																									.	.
Template Sequence		I	S	L	Q	K	V	F	L	S	H	A	D	R	.	.	.	.	K	V	W	L	L	F	D	Y	A	E	H	D	L	W	H	I	I	K	F	H	R	A	S	K	.	.	L	P	R	G	M	V	K	S	L	L	Y	Q	I	L	D	G	I	H	Y	L	H	A	N	W	V	L	H	R	D	L	K	P	A	N	I	L	V
Template Known Secondary structure											T	T	T	T	.	.	.	.										S															.	.																							T	T								G	G	G
Template Predicted Secondary structure															.	.	.	.																									.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		162	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		K	T	E	G	.	.	N	A	E	A	G	F	L	D	L	E	K	S	R
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		M	G	E	G	P	E	R	G	R	V	K	I	A	D	M	G	F	A	R
Template Known Secondary structure				S	S	T	T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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