Job Description P27294 Confidence 99.87% Date Wed Jan 25 15:20:46 GMT 2012 Rank 38 Aligned Residues 160 % Identity 13% Template c3op5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: human vaccinia-related kinase 1 Resolution 2.40 Å

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		14	.	.	.	.	.	20	.	.	.						.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure												.	.	.	.	.						.	.														.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence												.	.	.	.	.						.	.														.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		W	A	T	E	G	D	W	V	E	E	.	.	.	.	.	P	N	Y	R	R	.	.	N	G	M	S	G	V	Q	C	V	E	R	N	G	.	.	.	.	.	.	.	K	K	L	Y	V	K	R	M	T	H	H	.	.	.	.	.	L	F	H	S	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K
Query Conservation												.	.	.	.	.						.	.														.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence												.	.	.	.	.						.	.														.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		Q	F	A	V	G	E	I	I	T	D	M	A	A	A	A	W	K	V	G	L	P	I	G	Q	F	G	C	I	Y	L	A	D	M	N	S	S	E	S	V	G	S	D	A	P	C	V	V	K	V	E	P	S	D	N	G	P	L	F	T	E	L	K	F	Y	Q	R	A	A	K	P	E	Q	I	Q	K	W	I	R	T	R
Template Known Secondary structure			S		T	T						T	T											.													S	S				T	T		S								T	T																											T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	R	A	G	V	I	V	P	K	I	V	F	G	E	A	V	K	I	E	G	E	W	R	A	L	L	V	T	E	D	M	A	G	F	I	S	I	A	D	W	Y	A	Q	H	A	V	S	P	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	N	R	Q	H	G	C	C
Query Conservation
Alig confidence									.	.																									.															.	.
Template Conservation									.	.																									.															.	.
Template Sequence		K	L	K	Y	L	G	V	.	.	P	K	Y	W	G	S	G	L	H	D	K	N	G	K	S	Y	R	F	M	I	M	D	R	F	.	G	S	D	L	Q	K	I	Y	E	A	N	A	K	R	.	.	F	S	R	K	T	V	L	Q	L	S	L	R	I	L	D	I	L	E	Y	I	H	E	H	E	Y	V	H	G	D	I
Template Known Secondary structure		T		S				S	.	.												T	T												.											T	T	S		.	.																							T	T
Template Predicted Secondary structure									.	.																									.															.	.
Template SS confidence
		104	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	R	H	I	Y	V	K	T	E	G	N	A	E	A	G	F	L	D	L	E	K	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	S	N	L	L	L	N	Y	K	N	P	D	Q	V	Y	L	V	D	Y	G	L	A	Y
Template Known Secondary structure			G	G	G					S	S		T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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