|   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | W | V | E | E | P | N | Y | R | R | N | G | M | S | G | V | Q | C | V | E | R | . |
. |
N | G | K | K | L | Y | V | K | R | M | T | H | H | L | F | H | S | V | R | Y | P | F | G | R | P | T | I | V | R | E | V | A | V | I | K | E | L | E | R | A | G | V | I | V | P | K | I | V | F | G | E | A | V | K | I | E |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |
|
|   |   | . | . |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
N | A | F | L | V | I | R | K | M | G | D | G | T | F | G | R | V | L | L | C | Q | H | I | D | N | K | K | Y | Y | A | V | K | V | V | R | . |
. |
. |
. |
. |
. |
. |
N | I | K | K | Y | T | R | S | A | K | I | E | A | D | I | L | K | K | I | Q | N | D | D | I | N | N | N | N | I | V | K | Y | H | G | K | F | M | Y |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| S | T | T | G | G | G | B |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . |
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | W | R | A | L | L | V | T | E | D | M | A | G | F | I | S | I | A | D | W | Y | A | Q | H | A | V | S | P | Y | S | D | E | V | R | Q | A | M | L | K | A | V | A | L | A | F | K | K | M | H | S | I | N | R | Q | H | G | C | C | Y | V | R | H | I | Y | V | K | T | E | G | N | A | E | A | G | F | L | D | L | E |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |
|
|
|   |   |
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |
Template Sequence |   |
Y | D | . |
. |
. |
H | M | C | L | I | F | E | P | L | G | P | S | L | Y | E | I | I | T | R | N | N | Y | N | G | F | H | I | E | D | I | K | L | Y | C | I | E | I | L | K | A | L | N | Y | L | R | K | M | S | L | T | H | T | D | L | K | P | E | N | I | L | L | D | D | P | Y | F | . |
. |
E | K | S | L | I | T | V |
Template Known Secondary structure |   |
T | T | . | . | . |  |  |  |  |  |  |
|
|
|
|
| B |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |
| S |
|
| S | G | G | G |  |  |  | S |
| T | T |
| . | . |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
623 | . | |
|
|
. | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | |
|
. | . | . | . | . | . | . |
  |
  |   |
176 | . | . |
Predicted Secondary structure |   |
|
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
K | S | R |
Query Conservation |   |
  |   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
R | R | V |
Template Known Secondary structure |   |
 |
| T |
Template Predicted Secondary structure |   |
|
|
|
Template SS confidence |   |
|
|
|
  |   |
698 | . | 700 |
  |