Return to main results Retrieve Phyre Job Id

Job DescriptionP27294
Confidence99.81%DateWed Jan 25 15:20:46 GMT 2012
Rank73Aligned Residues153
% Identity18%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30......... 40.........50.........60.........70.........80.........90..
Predicted Secondary structure 













..














Query SS confidence 
























. .




















































Query Sequence  ATEGDWVEEPNYRRNGMSGVQCVER. . NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAV
Query Conservation    

        



   
 

  .. 
  



                    

   
  
    
           
Alig confidence 
























..

















.....





























Template Conservation       
 
   

 
 

 

      
    


 
        .....      

  
  
 




 
        
Template Sequence  TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP. . . . . MEQIEAEIEVLKSLDHPNIIKIFEVFEDYH
Template Known Secondary structure 

SS
TTT

GGGBSS
.....T


TTB


SS
Template Predicted Secondary structure 













.....














Template SS confidence 















































































   130.........140.........150.........160.........170.... .....180.........190.........200....
 
   93......100.........110...... ...120.........130.........140.........150.........160..... ....170
Predicted Secondary structure 










.




















.
Query SS confidence 























.
















































.




Query Sequence  KIEGEWRALLVTEDMAGFISIADW. YAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEG. NAEAG
Query Conservation           

 
 
 
      
.        
       
   
  

  

  








 



   
.   
 
Alig confidence  ......

















.
















































.




Template Conservation  ......   

 
      
                                               
            
Template Sequence  . . . . . . NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIK
Template Known Secondary structure  ......



S
BT



TT


S


GGGSSSSTT

Template Predicted Secondary structure  ......












































Template SS confidence 















































































   205....210.........220.........230.........240.........250.........260.........270........
 
   171.......
Predicted Secondary structure 




Query SS confidence 







Query Sequence  FLDLEKSR
Query Conservation 


    
Alig confidence 







Template Conservation    
     
Template Sequence  IIDFGLAE
Template Known Secondary structure 




GG
Template Predicted Secondary structure 







Template SS confidence 







   279280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions