Job Description P27294 Confidence 99.05% Date Wed Jan 25 15:20:46 GMT 2012 Rank 289 Aligned Residues 172 % Identity 15% Template c3f2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase alpha; PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3 Resolution 2.35 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	W	W	A	T	E	G	D	W	V	E	E	P	N	Y	R	R	N	G	M	S	G	V	Q	C	V	E	R	N	G	K	K	L	Y	V	K	R	M	T	H	H	L	F	H	S	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K	E	L	E	R	A	G	V	I	V	P	K	I	V	F	G	E	A
Query Conservation
Alig confidence																																																						.	.	.	.	.														.
Template Conservation																																																						.	.	.	.	.														.
Template Sequence		A	W	R	G	L	R	E	D	E	F	H	I	S	V	I	R	G	G	L	S	N	M	L	F	Q	C	S	L	P	D	T	T	A	T	L	G	D	E	P	R	K	V	L	L	R	L	Y	G	A	M	V	L	.	.	.	.	.	E	S	V	M	F	A	I	L	A	E	R	S	L	.	G	P	K	L	Y	G	I	F	P
Template Known Secondary structure		G	G	T	T			G	G	G									S	S	S										T	T				S	S	S			S													.	.	.	.	.											T	T	S	.	S								T
Template Predicted Secondary structure																																																						.	.	.	.	.														.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	I	E	G	E	W	R	A	L	L	V	T	E	D	M	A	G	F	I	S	I	A	D	W	Y	A	Q	H	A	V	S	P	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	.	.	.	.	.	.	.	G	R	L	E	Q	F	I	P	S	R	R	L	D	T	E	E	L	S	L	P	.	.	.	.	.	.	.	.	.	.	.	D	I	S	A	E	I	A	E	K	M	A	T	F	H	G	M	K	M	P	F	N	K	E	P	K	W	L	F	G	T	M	E	K	Y	L	K	E	V	L	R
Template Known Secondary structure		T	.	.	.	.	.	.	.	.														G	G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.															T				S	S			S																	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.												.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
																																									149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	H	G	C	C	Y	V	R	H	I	Y	V	K	T	E	.	.	.	.	G	N	A	E	A	G	F	L	D	L	E	K	S	R	R	R	L	R	R	D	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		I	K	F	T	E	E	S	R	I	K	K	L	H	K	L	L	S	Y	N	L	P	L	E	L	E	N	L	R	S	L	L	E	S	T	P	S	P	V	V	F	C	H	N	D	C	Q	E	G	N	I	L	L	L	E	G	R	E	N	S	E	K	Q	K	L	M	L	I	D	F	E	Y	S	S	Y	N	Y	R	.	.	.
Template Known Secondary structure						S												T	T															T	S									S			S	G	G	G					T	T	G	G	G		S	S		S							T	T							.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.																		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	N	H	D	F	R	Q	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	E	P	I	P	K	A	D	W	E	Q	V	K	A	Y	Y
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	F	D	I	G	N	H	F	C	E	W	M	Y	D	Y	S	Y	E	K	Y	P	F	F	R	A	N	I	R	K	Y	P	T	K	K	Q	Q	L	H	F	I	S	S	Y
Template Known Secondary structure		.	.											T	T			T	T		S	S	T	T	S					G	G	G	S
Template Predicted Secondary structure		.	.
Template SS confidence
				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions