Job Description P27294 Confidence 99.03% Date Wed Jan 25 15:20:46 GMT 2012 Rank 291 Aligned Residues 152 % Identity 18% Template c3dxqB_ PDB info PDB header:transferase Chain: B: PDB Molecule:choline/ethanolamine kinase family protein; PDBTitle: crystal structure of choline/ethanolamine kinase family protein2 (np_106042.1) from mesorhizobium loti at 2.55 a resolution Resolution 2.55 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	M	S	G	V	Q	C	V	E	R	N	G	K	K	L	Y	V	K	R	M	T	H	H	L	F	H	S	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K	E	L	E	R	A	G	V	I	V	P	K	I	V	F	G	E	A	V	K	I	E	G	E	W	R	A	L	L	V	T	E	D	M	A
Query Conservation
Alig confidence											.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.													.	.	.	.	.	.
Template Conservation											.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.													.	.	.	.	.	.
Template Sequence		G	L	T	N	L	V	F	R	A	.	.	.	.	G	D	L	C	L	R	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	A	N	E	A	V	A	A	R	E	A	A	K	A	G	V	.	S	P	E	V	L	H	V	D	P	A	T	G	.	.	.	.	.	.	V	X	V	T	R	Y	I	A
Template Known Secondary structure		S	S	S	S						.	.	.	.	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	S	.	S								T	T	T		.	.	.	.	.	.								T
Template Predicted Secondary structure											.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.													.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.																.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.
		109	110	.	.																																									.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		G	F	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	D	W	Y	A	Q	H	A	V	S	P	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		G	A	Q	T	X	S	P	E	K	F	K	T	R	P	G	S	P	A	R	A	G	E	A	F	R	K	L	H	G	S	G	A	V	F	P	F	R	F	E	L	F	A	X	I	D	D	Y	L	K	V	L	S	T	K	N	V	T	L	P	A	G	Y	H	D	V	V	R	E	A	G	G	V	R	S	A	L	A	A	H	P
Template Known Secondary structure		T												S	T	T														T	S					S	S	B															T	T							T	T																	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
					148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	R	Q	H	G	C	C	Y	V	R	H	I	Y	V	K	T	E	G	N	A	E	A	G	F	L	D	L	E	K	S	R	R	R	L	R	R	D	K	A	I	N	H	D	F	R	Q	L	E	K	Y	L	E	P	I	P	K	A	D	W	E	Q	V	K	A	Y	Y	Y	A
Query Conservation		.	.	.
Alig confidence		.	.	.																			.	.	.															.	.	.	.	.											.
Template Conservation																							.	.	.															.	.	.	.	.											.
Template Sequence		L	P	L	A	A	C	H	C	D	P	L	C	E	N	F	L	D	T	G	E	R	.	.	.	X	W	I	V	D	W	E	Y	S	G	X	N	D	P	.	.	.	.	.	L	W	D	L	G	D	L	S	V	E	.	G	K	F	N	A	N	Q	D	E	E	L	X	R	A	Y	F	G
Template Known Secondary structure									S				G	G	G					S	S		.	.	.							T	T							.	.	.	.	.											.	T	T															T
Template Predicted Secondary structure																							.	.	.															.	.	.	.	.											.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions