Job Description P27294 Confidence 99.80% Date Wed Jan 25 15:20:46 GMT 2012 Rank 85 Aligned Residues 147 % Identity 16% Template c2y94A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5'-amp-activated protein kinase catalytic subunit alpha-1; PDBTitle: structure of an active form of mammalian ampk Resolution 3.24 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		G	D	W	V	E	E	P	N	Y	R	R	N	G	M	S	G	V	Q	C	V	E	R	.	.	N	G	K	K	L	Y	V	K	R	M	T	H	H	L	F	H	S	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K	E	L	E	R	A	G	V	I	V	P	K	I	V	F	G	E	A	V	K	I	E
Query Conservation																								.	.
Alig confidence																								.	.													.	.	.																																							.	.	.
Template Conservation																																						.	.	.																																							.	.	.
Template Sequence		G	H	Y	I	L	G	D	T	L	G	V	G	T	F	G	K	V	K	V	G	K	H	E	L	T	G	H	K	V	A	V	K	I	L	N	R	.	.	.	Q	K	I	R	S	L	D	V	V	G	K	I	R	R	E	I	Q	N	L	K	L	F	R	H	P	H	I	I	K	L	Y	Q	V	I	S	T	P	S	.	.	.
Template Known Secondary structure		T	T											S	S	S								T	T	T												.	.	.						T	T	T												T	T				T	T	B										S	S	.	.	.
Template Predicted Secondary structure																																						.	.	.																																							.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	W	R	A	L	L	V	T	E	D	M	A	G	F	I	S	I	A	D	W	Y	A	Q	H	A	V	S	P	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	N	R	Q	H	G	C	C	Y	V	R	H	I	Y	V	K	T	E	G	N	A	E	A	G	F	L	D	L	E
Query Conservation
Alig confidence		.	.	.																		.	.	.																																																	.	.
Template Conservation		.	.	.																		.	.	.																																																	.	.
Template Sequence		.	.	.	D	I	F	M	V	M	E	Y	V	S	G	G	E	L	F	D	Y	.	.	.	I	C	K	N	G	R	L	D	E	K	E	S	R	R	L	F	Q	Q	I	L	S	G	V	D	Y	C	H	R	H	M	V	V	H	R	D	L	K	P	E	N	V	L	L	D	A	H	M	N	.	.	A	K	I	A	D	F	G
Template Known Secondary structure		.	.	.										S	S							.	.	.	T	T	S	S	S	S																						T	T	T				S			S	G	G	G					T	T			.	.							S
Template Predicted Secondary structure		.	.	.																		.	.	.																																																	.	.
Template SS confidence
					88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.
		176	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions