Job Description P27294 Confidence 99.48% Date Wed Jan 25 15:20:46 GMT 2012 Rank 232 Aligned Residues 165 % Identity 14% Template c2pywA_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of a. thaliana 5-methylthioribose kinase in complex with adp2 and mtr Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																													.																								.
Query SS confidence																																													.																								.
Query Sequence		W	A	T	E	G	D	W	V	E	E	P	N	Y	R	R	N	G	M	S	G	V	Q	C	V	E	R	N	G	K	K	L	Y	V	K	R	M	T	H	H	L	F	H	S	.	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K	E	L	E	R	A	.	G	V	I	V	P	K	I	V	F	G	E	A
Query Conservation																																													.																								.
Alig confidence																																													.																								.
Template Conservation
Template Sequence		A	D	K	S	D	D	D	L	V	I	K	E	V	G	D	G	N	L	N	F	V	F	I	V	V	G	S	S	G	S	L	V	I	K	Q	A	L	P	Y	I	R	C	I	G	E	S	W	P	M	T	K	E	R	A	Y	F	E	A	T	T	L	R	K	H	G	N	L	S	P	D	H	V	P	E	V	Y	H	F	D	R
Template Known Secondary structure		T	T	T													S	S	S									S	S										S	B		T	T	T		T	T	S	B			T	T																S	G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	I	E	G	E	W	R	A	L	L	V	T	E	D	M	A	G	F	I	S	I	A	D	W	Y	A	Q	H	A	V	S	P	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		T	M	A	.	.	.	.	.	.	L	I	G	M	R	Y	L	E	P	P	H	I	I	L	R	K	G	L	I	A	G	I	E	Y	P	.	.	.	.	.	.	F	L	A	D	H	M	S	D	Y	M	A	K	T	L	F	F	T	S	L	L	Y	H	D	T	T	E	H	R	R	A	V	T	E	F	C	G	N	V	E	L
Template Known Secondary structure		T	T	T	.	.	.	.	.	.									T	T											T				T	.	.	.	.	.	.	T															T	T	S	T	T	T	S													G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
																																																										149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	H	G	C	C	Y	V	R	H	I	Y	V	K	T	E	G	N	A	E	A	G	F	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		C	R	L	T	E	Q	V	V	F	S	D	P	Y	R	V	S	T	F	N	R	W	T	S	P	Y	L	D	D	D	A	K	A	V	R	E	D	S	A	L	K	L	E	I	A	E	L	K	S	M	F	C	E	R	A	Q	A	L	I	H	G	D	L	H	T	G	S	V	M	V	T	Q	D	S	.	.	.	T	Q	V	I
Template Known Secondary structure									T	T	T	G	G	G	S			T	T				S	T	T	T	T								T	T																									S			S	G	G	G					S	S		.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	K	S	R	R	R	L	R	R	D	K	A	I	N	H	D	F	R	Q	L	E	K	Y	L
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		D	P	E	F	S	F	Y	G	P	M	.	.	.	.	.	G	F	D	I	G	A	Y	L	G	N	L
Template Known Secondary structure				T	T							.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions