Return to main results Retrieve Phyre Job Id

Job DescriptionP27294
Confidence99.77%DateWed Jan 25 15:20:46 GMT 2012
Rank109Aligned Residues139
% Identity19%Templatec2onlD_
PDB info PDB header:transferaseChain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30 ......... 40.........50.........60.........70...... ...80.........90.........100.
Predicted Secondary structure 




.
..









.









Query SS confidence 




.








. .




































.
























Query Sequence  YRRNG. MSGVQCVER. . NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKEL. ERAGVIVPKIVFGEAVKIEGEWRAL
Query Conservation   



.   
 

  .. 
  



                    

   
  
.    
                    
Alig confidence 




.








..











...........













.




..

















Template Conservation           

       
  



 
  ...........      

 

  
  



..
                 
Template Sequence  IKKNAIIDDVLQIFNKRTQEKFALKMLQD. . . . . . . . . . . CPKARREVELHWRASQCPHI. . VRIVDVYENLYAGRKCLL
Template Known Secondary structure 
B
S

S




TTT



...........STT

STTB..

TT
Template Predicted Secondary structure 














...........




..






Template SS confidence 















































































   54.....60.........70.........80.. .......90.........100.. .......110.........120
 
   102.......110.........120.........130.........140.........150.........160..... ....170........
Predicted Secondary structure 


























.





Query SS confidence 































































.












Query Sequence  LVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEG. NAEAGFLDLEKSR
Query Conservation 

 
 
 
      
        
       
   
  

  

  








 



   
.   
 


    
Alig confidence 













.
















































.












Template Conservation 

 
      
   .        
           
   
  

     
                      


   
Template Sequence  IVMECLDGGELFSR. IQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK
Template Known Secondary structure 


S.S
SS


BTT




GGGSSSSTT




SS
Template Predicted Secondary structure 









.









































Template SS confidence 













































































   136...140......... 150.........160.........170.........180.........190.........200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions