Job Description P27294 Confidence 99.83% Date Wed Jan 25 15:20:46 GMT 2012 Rank 65 Aligned Residues 152 % Identity 16% Template c2ivsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure							.																						.	.	.	.	.	.	.
Query SS confidence							.																						.	.	.	.	.	.	.
Query Sequence		W	A	T	E	G	.	D	W	V	E	E	P	N	Y	R	R	N	G	M	S	G	V	Q	C	V	E	R	.	.	.	.	.	.	.	N	G	K	K	L	Y	V	K	R	M	T	H	H	L	F	H	S	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K	E	L	E	R	A	G	V	I	V	P	K
Query Conservation							.																						.	.	.	.	.	.	.
Alig confidence							.																						.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		W	E	F	P	R	K	N	L	V	L	G	K	T	L	G	E	G	E	F	G	K	V	V	K	A	T	A	F	H	L	K	G	R	A	G	Y	T	T	V	A	V	K	M	L	K	E	N	A	S	P	S	E	.	.	.	.	.	L	R	D	L	L	S	E	F	N	V	L	K	Q	V	N	H	P	H	V	I	K	L	Y
Template Known Secondary structure		T	B			G	G	G											S	S	S									T	G	G	G		S	S											T	T						.	.	.	.	.												T	T				T	T	B
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.						.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		I	V	F	G	E	A	V	K	I	E	G	E	W	R	A	L	L	V	T	E	D	M	A	G	F	I	S	I	A	D	W	Y	A	Q	H	A	V	S	P	.	.	.	.	.	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	N	R	Q	H	G	C	C	Y	V	R	H	I	Y
Query Conservation																																									.	.	.	.	.
Alig confidence											.	.	.	.	.	.																									.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		G	A	C	S	Q	D	G	P	L	.	.	.	.	.	.	L	L	I	V	E	Y	A	K	Y	G	S	L	R	G	F	L	R	E	S	R	K	V	G	P	G	Y	L	R	A	L	T	M	G	D	L	I	S	F	A	W	Q	I	S	Q	G	M	Q	Y	L	A	E	M	K	L	V	H	R	D	L	A	A	R	N	I	L
Template Known Secondary structure						S	S	S	S		.	.	.	.	.	.								T	T		B								T	T	T	S	T	T																												T	T							S	G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		792	.	.	.	.	.	.	.	800							.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	E	G	N	A	E	A	G	F	L	D	L	E	K	S	R
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		V	A	E	G	R	.	.	K	M	K	I	S	D	F	G	L	S	R
Template Known Secondary structure				T	T	T	.	.								T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		882	.	.	.	.			.	.	.	890	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions