Job Description P27294 Confidence 99.87% Date Wed Jan 25 15:20:46 GMT 2012 Rank 34 Aligned Residues 147 % Identity 12% Template c2a1aB_ PDB info PDB header:protein synthesis/transferase Chain: B: PDB Molecule:interferon-induced, double-stranded rna-activated protein PDBTitle: pkr kinase domain-eif2alpha complex Resolution 2.80 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																							.	.																																																								.	.
Query SS confidence																							.	.																																																								.	.
Query Sequence		D	W	V	E	E	P	N	Y	R	R	N	G	M	S	G	V	Q	C	V	E	R	.	.	N	G	K	K	L	Y	V	K	R	M	T	H	H	L	F	H	S	V	R	Y	P	F	G	R	P	T	I	V	R	E	V	A	V	I	K	E	L	E	R	A	G	V	I	V	P	K	I	V	F	G	E	A	V	K	I	.	.
Query Conservation																							.	.																																																								.	.
Alig confidence																							.	.															.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	K	E	I	E	L	I	G	S	G	G	F	G	Q	V	F	K	A	K	H	R	I	D	G	K	T	Y	V	I	K	R	V	K	Y	N	N	.	.	.	.	.	.	.	.	.	.	E	K	A	E	R	E	V	K	A	L	A	K	L	D	H	V	N	I	V	H	Y	N	G	C	W	D	G	F	D	Y	D	P	E
Template Known Secondary structure													S	S									S	S	S													S	.	.	.	.	.	.	.	.	.	.	G	G	G	G							T	T				T	T	B														T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.											.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
						95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	E	G	E	W	R	A	L	L	V	T	E	D	M	A	G	F	I	S	I	A	D	W	Y	A	Q	H	A	V	S	P	Y	S	D	E	V	R	Q	A	M	L	K	A	V	A	L	A	F	K	K	M	H	S	I	N	R	Q	H	G	C	C	Y	V	R	H	I	Y	V	K	T	E	G	N	A	E	A	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																														.																																										.	.
Template Conservation																																			.																																										.	.
Template Sequence		T	S	S	R	S	K	T	K	C	L	F	I	Q	M	E	F	C	D	K	G	T	L	E	Q	W	I	E	K	R	R	G	E	K	.	L	D	K	V	L	A	L	E	L	F	E	Q	I	T	K	G	V	D	Y	I	H	S	K	K	L	I	N	R	D	L	K	P	S	N	I	F	L	V	D	T	K	.	.	Q	V	K
Template Known Secondary structure																			T	T		B									T	T	S		.																							T	T				T	T		S	G	G	G						T	T	.	.
Template Predicted Secondary structure																																			.																																										.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.
		171	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	D	L	E	K	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	D	F	G	L	V	T
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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