Return to main results Retrieve Phyre Job Id

Job DescriptionP27294
Confidence99.95%DateWed Jan 25 15:20:46 GMT 2012
Rank5Aligned Residues149
% Identity13%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30......... 40.........50.........60.........70.........80.........90......
Predicted Secondary structure 









..


















Query SS confidence 




















. .
























































Query Sequence  DWVEEPNYRRNGMSGVQCVER. . NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEG
Query Conservation          



   
 

  .. 
  



                    

   
  
    
               
Alig confidence 




















..




















































....
Template Conservation 

     

 
 

 

      

   


 
 
              
      
    

 

 
        ....
Template Sequence  DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD. . . .
Template Known Secondary structure  G
SSSTTT

TTSSS

SSB

TT....
Template Predicted Secondary structure 




















....
Template SS confidence 















































































   190.........200.........210.........220.........230.........240.........250.........260.....
 
   97..100.........110.........120.........130.........140.........150.........160.........170......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  EWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEK
Query Conservation       

 
 
 
      
        
       
   
  

  

  








 



   
   
 


   
Alig confidence  ..



















...












































..







Template Conservation  ..   



   

 
   
  ...   
 
        

   
  

   







 



     ..


 


 
Template Sequence  . . KLSFILDLMNGGDLHYHLSQ. . . HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH. . VRISDLGL
Template Known Secondary structure  ..


S
B...
S

TT




GGG
TTS
..


TT
Template Predicted Secondary structure  ..





...



















..


Template SS confidence 















































































   266...270.........280..... ....290.........300.........310.........320.........330 ........
 
   177.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  SR
Query Conservation   
Alig confidence 

Template Conservation 
 
Template Sequence  AC
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   339340
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions